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GTF3A (general transcription factor IIIA)

Identity

Alias_symbol (synonym)TFIIIA
AP2
Other alias
HGNC (Hugo) GTF3A
LocusID (NCBI) 2971
Atlas_Id 43752
Location 13q12.2  [Link to chromosome band 13q12]
Location_base_pair Starts at 27424544 and ends at 27435709 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GTF3A (13q12.2) / MCM2 (3q21.3)KIAA1549 (7q34) / GTF3A (13q12.2)SART3 (12q23.3) / GTF3A (13q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GTF3A   4662
Cards
Entrez_Gene (NCBI)GTF3A  2971  general transcription factor IIIA
AliasesAP2; TFIIIA
GeneCards (Weizmann)GTF3A
Ensembl hg19 (Hinxton)ENSG00000122034 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000122034 [Gene_View]  ENSG00000122034 [Sequence]  chr13:27424544-27435709 [Contig_View]  GTF3A [Vega]
ICGC DataPortalENSG00000122034
TCGA cBioPortalGTF3A
AceView (NCBI)GTF3A
Genatlas (Paris)GTF3A
WikiGenes2971
SOURCE (Princeton)GTF3A
Genetics Home Reference (NIH)GTF3A
Genomic and cartography
GoldenPath hg38 (UCSC)GTF3A  -     chr13:27424544-27435709 +  13q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GTF3A  -     13q12.2   [Description]    (hg19-Feb_2009)
GoldenPathGTF3A - 13q12.2 [CytoView hg19]  GTF3A - 13q12.2 [CytoView hg38]
ImmunoBaseENSG00000122034
Mapping of homologs : NCBIGTF3A [Mapview hg19]  GTF3A [Mapview hg38]
OMIM600860   
Gene and transcription
Genbank (Entrez)AK057993 AW627732 BC143711 BP254755 D32257
RefSeq transcript (Entrez)NM_002097
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GTF3A
Alternative Splicing GalleryENSG00000122034
Gene ExpressionGTF3A [ NCBI-GEO ]   GTF3A [ EBI - ARRAY_EXPRESS ]   GTF3A [ SEEK ]   GTF3A [ MEM ]
Gene Expression Viewer (FireBrowse)GTF3A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)2971
GTEX Portal (Tissue expression)GTF3A
Human Protein AtlasENSG00000122034-GTF3A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GTF3A
DMDM Disease mutations2971
Blocks (Seattle)GTF3A
Human Protein Atlas [tissue]ENSG00000122034-GTF3A [tissue]
HPRD02916
IPIIPI00294241   IPI00885034   IPI00893619   IPI00894324   IPI00894459   
Protein Interaction databases
FunCoupENSG00000122034
BioGRIDGTF3A
STRING (EMBL)GTF3A
ZODIACGTF3A
Ontologies - Pathways
Huge Navigator GTF3A [HugePedia]
snp3D : Map Gene to Disease2971
BioCentury BCIQGTF3A
ClinGenGTF3A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2971
Chemical/Pharm GKB GenePA29048
Clinical trialGTF3A
Miscellaneous
canSAR (ICR)GTF3A (select the gene name)
DataMed IndexGTF3A
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGTF3A
EVEXGTF3A
GoPubMedGTF3A
iHOPGTF3A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 16:46:49 CET 2020

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