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GTPBP8 (GTP binding protein 8 (putative))

Identity

Alias_namesGTP-binding protein 8 (putative)
Alias_symbol (synonym)HSPC135
Other alias
HGNC (Hugo) GTPBP8
LocusID (NCBI) 29083
Atlas_Id 64106
Location 3q13.2  [Link to chromosome band 3q13]
Location_base_pair Starts at 112990953 and ends at 113001374 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GTPBP8   25007
Cards
Entrez_Gene (NCBI)GTPBP8  29083  GTP binding protein 8 (putative)
AliasesHSPC135
GeneCards (Weizmann)GTPBP8
Ensembl hg19 (Hinxton)ENSG00000163607 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163607 [Gene_View]  chr3:112990953-113001374 [Contig_View]  GTPBP8 [Vega]
ICGC DataPortalENSG00000163607
TCGA cBioPortalGTPBP8
AceView (NCBI)GTPBP8
Genatlas (Paris)GTPBP8
WikiGenes29083
SOURCE (Princeton)GTPBP8
Genetics Home Reference (NIH)GTPBP8
Genomic and cartography
GoldenPath hg38 (UCSC)GTPBP8  -     chr3:112990953-113001374 +  3q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GTPBP8  -     3q13.2   [Description]    (hg19-Feb_2009)
EnsemblGTPBP8 - 3q13.2 [CytoView hg19]  GTPBP8 - 3q13.2 [CytoView hg38]
Mapping of homologs : NCBIGTPBP8 [Mapview hg19]  GTPBP8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF161484 AI367201 AK093419 AK289611 AK292651
RefSeq transcript (Entrez)NM_001008235 NM_001008236 NM_014170 NM_138485
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GTPBP8
Cluster EST : UnigeneHs.127496 [ NCBI ]
CGAP (NCI)Hs.127496
Alternative Splicing GalleryENSG00000163607
Gene ExpressionGTPBP8 [ NCBI-GEO ]   GTPBP8 [ EBI - ARRAY_EXPRESS ]   GTPBP8 [ SEEK ]   GTPBP8 [ MEM ]
Gene Expression Viewer (FireBrowse)GTPBP8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29083
GTEX Portal (Tissue expression)GTPBP8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3Z3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3Z3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3Z3
Splice isoforms : SwissVarQ8N3Z3
PhosPhoSitePlusQ8N3Z3
Domaine pattern : Prosite (Expaxy)G_ENGB (PS51706)   
Domains : Interpro (EBI)G_ENGB_dom    GTP-bd_ribosome_bio_YsxC    GTP_binding_domain    P-loop_NTPase   
Domain families : Pfam (Sanger)MMR_HSR1 (PF01926)   
Domain families : Pfam (NCBI)pfam01926   
Conserved Domain (NCBI)GTPBP8
DMDM Disease mutations29083
Blocks (Seattle)GTPBP8
SuperfamilyQ8N3Z3
Human Protein AtlasENSG00000163607
Peptide AtlasQ8N3Z3
HPRD13700
IPIIPI00107246   IPI00292183   IPI00514066   IPI00745708   IPI00790318   IPI00977072   IPI00947445   IPI00945630   
Protein Interaction databases
DIP (DOE-UCLA)Q8N3Z3
IntAct (EBI)Q8N3Z3
FunCoupENSG00000163607
BioGRIDGTPBP8
STRING (EMBL)GTPBP8
ZODIACGTPBP8
Ontologies - Pathways
QuickGOQ8N3Z3
Ontology : AmiGOGTP binding  mitochondrion  mitochondrion  metal ion binding  
Ontology : EGO-EBIGTP binding  mitochondrion  mitochondrion  metal ion binding  
NDEx NetworkGTPBP8
Atlas of Cancer Signalling NetworkGTPBP8
Wikipedia pathwaysGTPBP8
Orthology - Evolution
OrthoDB29083
GeneTree (enSembl)ENSG00000163607
Phylogenetic Trees/Animal Genes : TreeFamGTPBP8
HOVERGENQ8N3Z3
HOGENOMQ8N3Z3
Homologs : HomoloGeneGTPBP8
Homology/Alignments : Family Browser (UCSC)GTPBP8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGTPBP8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GTPBP8
dbVarGTPBP8
ClinVarGTPBP8
1000_GenomesGTPBP8 
Exome Variant ServerGTPBP8
ExAC (Exome Aggregation Consortium)GTPBP8 (select the gene name)
Genetic variants : HAPMAP29083
Genomic Variants (DGV)GTPBP8 [DGVbeta]
DECIPHERGTPBP8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGTPBP8 
Mutations
ICGC Data PortalGTPBP8 
TCGA Data PortalGTPBP8 
Broad Tumor PortalGTPBP8
OASIS PortalGTPBP8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGTPBP8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGTPBP8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch GTPBP8
DgiDB (Drug Gene Interaction Database)GTPBP8
DoCM (Curated mutations)GTPBP8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GTPBP8 (select a term)
intoGenGTPBP8
Cancer3DGTPBP8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGTPBP8
Genetic Testing Registry GTPBP8
NextProtQ8N3Z3 [Medical]
TSGene29083
GENETestsGTPBP8
Target ValidationGTPBP8
Huge Navigator GTPBP8 [HugePedia]
snp3D : Map Gene to Disease29083
BioCentury BCIQGTPBP8
ClinGenGTPBP8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29083
Chemical/Pharm GKB GenePA142671705
Clinical trialGTPBP8
Miscellaneous
canSAR (ICR)GTPBP8 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGTPBP8
EVEXGTPBP8
GoPubMedGTPBP8
iHOPGTPBP8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:05 CEST 2017

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