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GULP1 (GULP, engulfment adaptor PTB domain containing 1)

Identity

Alias_symbol (synonym)CED6
CED-6
GULP
Other alias
HGNC (Hugo) GULP1
LocusID (NCBI) 51454
Atlas_Id 54350
Location 2q32.1  [Link to chromosome band 2q32]
Location_base_pair Starts at 189156396 and ends at 189460652 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GULP1 (2q32.1) / FSIP2 (2q32.1)GULP1 (2q32.1) / GULP1 (2q32.1)GULP1 (2q32.1) / NCKAP1 (2q32.1)
GULP1 (2q32.1) / NUP35 (2q32.1)LRP1B (2q22.1) / GULP1 (2q32.1)MYCN (2p24.3) / GULP1 (2q32.1)
MYOT (5q31.2) / GULP1 (2q32.1)ZC3H15 (2q32.1) / GULP1 (2q32.1)GULP1 2q32.1 / FSIP2 2q32.1
GULP1 2q32.1 / NCKAP1 2q32.1GULP1 2q32.1 / NUP35 2q32.1ZC3H15 2q32.1 / GULP1 2q32.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GULP1   18649
Cards
Entrez_Gene (NCBI)GULP1  51454  GULP, engulfment adaptor PTB domain containing 1
AliasesCED-6; CED6; GULP
GeneCards (Weizmann)GULP1
Ensembl hg19 (Hinxton)ENSG00000144366 [Gene_View]  chr2:189156396-189460652 [Contig_View]  GULP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000144366 [Gene_View]  chr2:189156396-189460652 [Contig_View]  GULP1 [Vega]
ICGC DataPortalENSG00000144366
TCGA cBioPortalGULP1
AceView (NCBI)GULP1
Genatlas (Paris)GULP1
WikiGenes51454
SOURCE (Princeton)GULP1
Genetics Home Reference (NIH)GULP1
Genomic and cartography
GoldenPath hg19 (UCSC)GULP1  -     chr2:189156396-189460652 +  2q32.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GULP1  -     2q32.1   [Description]    (hg38-Dec_2013)
EnsemblGULP1 - 2q32.1 [CytoView hg19]  GULP1 - 2q32.1 [CytoView hg38]
Mapping of homologs : NCBIGULP1 [Mapview hg19]  GULP1 [Mapview hg38]
OMIM608165   
Gene and transcription
Genbank (Entrez)AB209890 AF075014 AF191771 AF200715 AK023668
RefSeq transcript (Entrez)NM_001252668 NM_001252669 NM_016315
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)GULP1
Cluster EST : UnigeneHs.712910 [ NCBI ]
CGAP (NCI)Hs.712910
Alternative Splicing GalleryENSG00000144366
Gene ExpressionGULP1 [ NCBI-GEO ]   GULP1 [ EBI - ARRAY_EXPRESS ]   GULP1 [ SEEK ]   GULP1 [ MEM ]
Gene Expression Viewer (FireBrowse)GULP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51454
GTEX Portal (Tissue expression)GULP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBP9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBP9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBP9
Splice isoforms : SwissVarQ9UBP9
PhosPhoSitePlusQ9UBP9
Domaine pattern : Prosite (Expaxy)PID (PS01179)   
Domains : Interpro (EBI)PH_dom-like    PTB/PI_dom   
Domain families : Pfam (Sanger)PID (PF00640)   
Domain families : Pfam (NCBI)pfam00640   
Domain families : Smart (EMBL)PTB (SM00462)  
Conserved Domain (NCBI)GULP1
DMDM Disease mutations51454
Blocks (Seattle)GULP1
SuperfamilyQ9UBP9
Human Protein AtlasENSG00000144366
Peptide AtlasQ9UBP9
HPRD12181
IPIIPI00790010   IPI00008468   IPI00915753   IPI00916366   IPI00910196   IPI00916652   IPI00556248   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBP9
IntAct (EBI)Q9UBP9
FunCoupENSG00000144366
BioGRIDGULP1
STRING (EMBL)GULP1
ZODIACGULP1
Ontologies - Pathways
QuickGOQ9UBP9
Ontology : AmiGOsignal transducer activity  cytoplasm  lipid transport  phagocytosis, engulfment  apoptotic process  signal transduction  
Ontology : EGO-EBIsignal transducer activity  cytoplasm  lipid transport  phagocytosis, engulfment  apoptotic process  signal transduction  
NDEx NetworkGULP1
Atlas of Cancer Signalling NetworkGULP1
Wikipedia pathwaysGULP1
Orthology - Evolution
OrthoDB51454
GeneTree (enSembl)ENSG00000144366
Phylogenetic Trees/Animal Genes : TreeFamGULP1
HOVERGENQ9UBP9
HOGENOMQ9UBP9
Homologs : HomoloGeneGULP1
Homology/Alignments : Family Browser (UCSC)GULP1
Gene fusions - Rearrangements
Fusion : MitelmanGULP1/FSIP2 [2q32.1/2q32.1]  
Fusion : MitelmanGULP1/NCKAP1 [2q32.1/2q32.1]  [t(2;2)(q32;q32)]  
Fusion : MitelmanGULP1/NUP35 [2q32.1/2q32.1]  [t(2;2)(q32;q32)]  
Fusion : MitelmanLRP1B/GULP1 [2q22.1/2q32.1]  [t(2;2)(q22;q32)]  
Fusion : MitelmanMYCN/GULP1 [2p24.3/2q32.1]  [t(2;2)(p24;q32)]  
Fusion : MitelmanZC3H15/GULP1 [2q32.1/2q32.1]  [t(2;2)(q32;q32)]  
Fusion: TCGAGULP1 2q32.1 FSIP2 2q32.1 BRCA
Fusion: TCGAGULP1 2q32.1 NCKAP1 2q32.1 PRAD
Fusion: TCGAGULP1 2q32.1 NUP35 2q32.1 BRCA
Fusion: TCGAZC3H15 2q32.1 GULP1 2q32.1 SKCM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGULP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GULP1
dbVarGULP1
ClinVarGULP1
1000_GenomesGULP1 
Exome Variant ServerGULP1
ExAC (Exome Aggregation Consortium)GULP1 (select the gene name)
Genetic variants : HAPMAP51454
Genomic Variants (DGV)GULP1 [DGVbeta]
DECIPHER (Syndromes)2:189156396-189460652  ENSG00000144366
CONAN: Copy Number AnalysisGULP1 
Mutations
ICGC Data PortalGULP1 
TCGA Data PortalGULP1 
Broad Tumor PortalGULP1
OASIS PortalGULP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGULP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGULP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GULP1
DgiDB (Drug Gene Interaction Database)GULP1
DoCM (Curated mutations)GULP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GULP1 (select a term)
intoGenGULP1
Cancer3DGULP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608165   
Orphanet
MedgenGULP1
Genetic Testing Registry GULP1
NextProtQ9UBP9 [Medical]
TSGene51454
GENETestsGULP1
Huge Navigator GULP1 [HugePedia]
snp3D : Map Gene to Disease51454
BioCentury BCIQGULP1
ClinGenGULP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51454
Chemical/Pharm GKB GenePA134993283
Clinical trialGULP1
Miscellaneous
canSAR (ICR)GULP1 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGULP1
EVEXGULP1
GoPubMedGULP1
iHOPGULP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:08:28 CET 2017

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