Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GUSBP11 (glucuronidase, beta pseudogene 11)

Identity

Other alias-
HGNC (Hugo) GUSBP11
LocusID (NCBI) 91316
Atlas_Id 64122
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23980675 and ends at 24059610 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GH1 (17q23.3) / GUSBP11 (22q11.23)GUSBP11 (22q11.23) / DSCAML1 (11q23.3)GUSBP11 (22q11.23) / GUSBP11 (22q11.23)
GUSBP11 (22q11.23) / NPIPB7 (16q23.1)GUSBP11 (22q11.23) / PQBP1 (Xp11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GUSBP11   42325
Cards
Entrez_Gene (NCBI)GUSBP11  91316  glucuronidase, beta pseudogene 11
Aliases
GeneCards (Weizmann)GUSBP11
Ensembl hg19 (Hinxton)ENSG00000228315 [Gene_View]  chr22:23980675-24059610 [Contig_View]  GUSBP11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000228315 [Gene_View]  chr22:23980675-24059610 [Contig_View]  GUSBP11 [Vega]
ICGC DataPortalENSG00000228315
TCGA cBioPortalGUSBP11
AceView (NCBI)GUSBP11
Genatlas (Paris)GUSBP11
WikiGenes91316
SOURCE (Princeton)GUSBP11
Genetics Home Reference (NIH)GUSBP11
Genomic and cartography
GoldenPath hg19 (UCSC)GUSBP11  -     chr22:23980675-24059610 -  22q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GUSBP11  -     22q11.23   [Description]    (hg38-Dec_2013)
EnsemblGUSBP11 - 22q11.23 [CytoView hg19]  GUSBP11 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIGUSBP11 [Mapview hg19]  GUSBP11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025313 AK056875 AK091837 AK125808 AK300413
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)GUSBP11
Cluster EST : UnigeneHs.148656 [ NCBI ]
CGAP (NCI)Hs.148656
Alternative Splicing GalleryENSG00000228315
Gene ExpressionGUSBP11 [ NCBI-GEO ]   GUSBP11 [ EBI - ARRAY_EXPRESS ]   GUSBP11 [ SEEK ]   GUSBP11 [ MEM ]
Gene Expression Viewer (FireBrowse)GUSBP11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)91316
GTEX Portal (Tissue expression)GUSBP11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GUSBP11
DMDM Disease mutations91316
Blocks (Seattle)GUSBP11
Human Protein AtlasENSG00000228315
Protein Interaction databases
FunCoupENSG00000228315
BioGRIDGUSBP11
STRING (EMBL)GUSBP11
ZODIACGUSBP11
Ontologies - Pathways
Huge Navigator GUSBP11 [HugePedia]
snp3D : Map Gene to Disease91316
BioCentury BCIQGUSBP11
ClinGenGUSBP11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91316
Clinical trialGUSBP11
Miscellaneous
canSAR (ICR)GUSBP11 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGUSBP11
EVEXGUSBP11
GoPubMedGUSBP11
iHOPGUSBP11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:14 CET 2017

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