Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GUSBP4 (glucuronidase, beta pseudogene 4)

Identity

Alias_namesC6orf216
SMAC3L
GUSBL2
chromosome 6 open reading frame 216
spinal muscular atrophy candidate gene 3-like
glucuronidase, beta-like 2
Alias_symbol (synonym)SMA3-L
FLJ13549
Other alias
HGNC (Hugo) GUSBP4
LocusID (NCBI) 375513
Atlas_Id 64125
Location 6p11.2  [Link to chromosome band 6p11]
Location_base_pair Starts at 57908573 and ends at 57911076 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LINC00680 (6p11.2) / GUSBP4 (6p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GUSBP4   18220
Cards
Entrez_Gene (NCBI)GUSBP4  375513  glucuronidase, beta pseudogene 4
AliasesC6orf216; GUSBL2; SMA3-L; SMAC3L
GeneCards (Weizmann)GUSBP4
Ensembl hg19 (Hinxton)ENSG00000215190 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215190 [Gene_View]  ENSG00000215190 [Sequence]  chr6:57908573-57911076 [Contig_View]  GUSBP4 [Vega]
ICGC DataPortalENSG00000215190
TCGA cBioPortalGUSBP4
AceView (NCBI)GUSBP4
Genatlas (Paris)GUSBP4
WikiGenes375513
SOURCE (Princeton)GUSBP4
Genetics Home Reference (NIH)GUSBP4
Genomic and cartography
GoldenPath hg38 (UCSC)GUSBP4  -     chr6:57908573-57911076 -  6p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GUSBP4  -     6p11.2   [Description]    (hg19-Feb_2009)
EnsemblGUSBP4 - 6p11.2 [CytoView hg19]  GUSBP4 - 6p11.2 [CytoView hg38]
Mapping of homologs : NCBIGUSBP4 [Mapview hg19]  GUSBP4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026691 AL831827 AW955360 DQ583004
RefSeq transcript (Entrez)NM_206908 NM_206910 NM_206912
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GUSBP4
Cluster EST : UnigeneHs.561539 [ NCBI ]
CGAP (NCI)Hs.561539
Alternative Splicing GalleryENSG00000215190
Gene ExpressionGUSBP4 [ NCBI-GEO ]   GUSBP4 [ EBI - ARRAY_EXPRESS ]   GUSBP4 [ SEEK ]   GUSBP4 [ MEM ]
Gene Expression Viewer (FireBrowse)GUSBP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375513
GTEX Portal (Tissue expression)GUSBP4
Human Protein AtlasENSG00000215190-GUSBP4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GUSBP4
DMDM Disease mutations375513
Blocks (Seattle)GUSBP4
Human Protein Atlas [tissue]ENSG00000215190-GUSBP4 [tissue]
HPRD16667
IPIIPI00783583   
Protein Interaction databases
FunCoupENSG00000215190
BioGRIDGUSBP4
STRING (EMBL)GUSBP4
ZODIACGUSBP4
Ontologies - Pathways
Huge Navigator GUSBP4 [HugePedia]
snp3D : Map Gene to Disease375513
BioCentury BCIQGUSBP4
ClinGenGUSBP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375513
Chemical/Pharm GKB GenePA134964286
Clinical trialGUSBP4
Miscellaneous
canSAR (ICR)GUSBP4 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGUSBP4
EVEXGUSBP4
GoPubMedGUSBP4
iHOPGUSBP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:48:22 CEST 2018

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