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GVQW2 (GVQW motif containing 2)

Identity

Other alias-
HGNC (Hugo) GVQW2
LocusID (NCBI) 100507462
Atlas_Id 77836
Location 6q24.1  [Link to chromosome band 6q24]
Location_base_pair Starts at 138725211 and ends at 138773679 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GVQW2   51715
Cards
Entrez_Gene (NCBI)GVQW2  100507462  GVQW motif containing 2
Aliases
GeneCards (Weizmann)GVQW2
Ensembl hg19 (Hinxton)ENSG00000279968 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000279968 [Gene_View]  ENSG00000279968 [Sequence]  chr6:138725211-138773679 [Contig_View]  GVQW2 [Vega]
ICGC DataPortalENSG00000279968
TCGA cBioPortalGVQW2
AceView (NCBI)GVQW2
Genatlas (Paris)GVQW2
WikiGenes100507462
SOURCE (Princeton)GVQW2
Genetics Home Reference (NIH)GVQW2
Genomic and cartography
GoldenPath hg38 (UCSC)GVQW2  -     chr6:138725211-138773679 -  6q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GVQW2  -     6q24.1   [Description]    (hg19-Feb_2009)
EnsemblGVQW2 - 6q24.1 [CytoView hg19]  GVQW2 - 6q24.1 [CytoView hg38]
Mapping of homologs : NCBIGVQW2 [Mapview hg19]  GVQW2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092592 DN917422
RefSeq transcript (Entrez)NM_001242740
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GVQW2
Cluster EST : UnigeneHs.571054 [ NCBI ]
CGAP (NCI)Hs.571054
Alternative Splicing GalleryENSG00000279968
Gene ExpressionGVQW2 [ NCBI-GEO ]   GVQW2 [ EBI - ARRAY_EXPRESS ]   GVQW2 [ SEEK ]   GVQW2 [ MEM ]
Gene Expression Viewer (FireBrowse)GVQW2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507462
GTEX Portal (Tissue expression)GVQW2
Human Protein AtlasENSG00000279968-GVQW2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A096LPI5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A096LPI5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A096LPI5
Splice isoforms : SwissVarA0A096LPI5
PhosPhoSitePlusA0A096LPI5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GVQW2
DMDM Disease mutations100507462
Blocks (Seattle)GVQW2
SuperfamilyA0A096LPI5
Human Protein Atlas [tissue]ENSG00000279968-GVQW2 [tissue]
Peptide AtlasA0A096LPI5
Protein Interaction databases
DIP (DOE-UCLA)A0A096LPI5
IntAct (EBI)A0A096LPI5
FunCoupENSG00000279968
BioGRIDGVQW2
STRING (EMBL)GVQW2
ZODIACGVQW2
Ontologies - Pathways
QuickGOA0A096LPI5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGVQW2
Atlas of Cancer Signalling NetworkGVQW2
Wikipedia pathwaysGVQW2
Orthology - Evolution
OrthoDB100507462
GeneTree (enSembl)ENSG00000279968
Phylogenetic Trees/Animal Genes : TreeFamGVQW2
HOVERGENA0A096LPI5
HOGENOMA0A096LPI5
Homologs : HomoloGeneGVQW2
Homology/Alignments : Family Browser (UCSC)GVQW2
Gene fusions - Rearrangements
Fusion : QuiverGVQW2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGVQW2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GVQW2
dbVarGVQW2
ClinVarGVQW2
1000_GenomesGVQW2 
Exome Variant ServerGVQW2
ExAC (Exome Aggregation Consortium)ENSG00000279968
GNOMAD BrowserENSG00000279968
Varsome BrowserGVQW2
Genetic variants : HAPMAP100507462
Genomic Variants (DGV)GVQW2 [DGVbeta]
DECIPHERGVQW2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGVQW2 
Mutations
ICGC Data PortalGVQW2 
TCGA Data PortalGVQW2 
Broad Tumor PortalGVQW2
OASIS PortalGVQW2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGVQW2
BioMutasearch GVQW2
DgiDB (Drug Gene Interaction Database)GVQW2
DoCM (Curated mutations)GVQW2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GVQW2 (select a term)
intoGenGVQW2
Cancer3DGVQW2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETGVQW2
MedgenGVQW2
Genetic Testing Registry GVQW2
NextProtA0A096LPI5 [Medical]
TSGene100507462
GENETestsGVQW2
Target ValidationGVQW2
Huge Navigator GVQW2 [HugePedia]
snp3D : Map Gene to Disease100507462
BioCentury BCIQGVQW2
ClinGenGVQW2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507462
Clinical trialGVQW2
Miscellaneous
canSAR (ICR)GVQW2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGVQW2
EVEXGVQW2
GoPubMedGVQW2
iHOPGVQW2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:48:23 CEST 2018

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