Atlas of Genetics and Cytogenetics in Oncology and Haematology


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H19 (H19, imprinted maternally expressed transcript (non-protein coding))

Identity

Other namesASM
ASM1
BWS
D11S813E
LINC00008
NCRNA00008
PRO2605
WT2
HGNC (Hugo) H19
LocusID (NCBI) 283120
Location 11p15.5
Location_base_pair Starts at 2016406 and ends at 2019065 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)H19   4713
Cards
Entrez_Gene (NCBI)H19  283120  H19, imprinted maternally expressed transcript (non-protein coding)
GeneCards (Weizmann)H19
Ensembl (Hinxton)ENSG00000130600 [Gene_View]  chr11:2016406-2019065 [Contig_View]  H19 [Vega]
AceView (NCBI)H19
Genatlas (Paris)H19
WikiGenes283120
SOURCE (Princeton)
Genomic and cartography
GoldenPath (UCSC)H19  -  11p15.5   chr11:2016406-2019065 -  11p15.5   [Description]    (hg19-Feb_2009)
EnsemblH19 - 11p15.5 [CytoView]
Mapping of homologs : NCBIH19 [Mapview]
OMIM103280   130650   180860   194071   
Gene and transcription
Genbank (Entrez)AK092486 AK123560 AL546946 AL548405 BC006831
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)AC_000143 NC_000011 NC_018922 NG_016165 NT_009237 NW_001838017 NW_004929378
Consensus coding sequences : CCDS (NCBI)H19
Cluster EST : UnigeneHs.533566 [ NCBI ]
CGAP (NCI)Hs.533566
Alternative Splicing : Fast-db (Paris)GSHG0005466
Alternative Splicing GalleryENSG00000130600
Gene ExpressionH19 [ NCBI-GEO ]     H19 [ SEEK ]   H19 [ MEM ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations283120
Human Protein AtlasENSG00000130600
IPIIPI00307804   IPI00001322   
Protein Interaction databases
FunCoupENSG00000130600
BioGRIDH19
IntegromeDBH19
STRING (EMBL)H19
Ontologies - Pathways
Ontology : AmiGO
Ontology : EGO-EBI
REACTOMEH19
Protein Interaction DatabaseH19
Wikipedia pathwaysH19
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)H19
SNP (GeneSNP Utah)H19
SNP : HGBaseH19
Genetic variants : HAPMAPH19
1000_GenomesH19 
ICGC programENSG00000130600 
Somatic Mutations in Cancer : COSMICH19 
CONAN: Copy Number AnalysisH19 
Mutations and Diseases : HGMDH19
OMIM103280    130650    180860    194071   
GENETestsH19
Disease Genetic AssociationH19
Huge Navigator H19 [HugePedia]  H19 [HugeCancerGEM]
Genomic VariantsH19  H19 [DGVbeta]
Exome VariantH19
dbVarH19
ClinVarH19
snp3D : Map Gene to Disease283120
General knowledge
Homologs : HomoloGeneH19
Homology/Alignments : Family Browser (UCSC)H19
Phylogenetic Trees/Animal Genes : TreeFamH19
Chemical/Protein Interactions : CTD283120
Chemical/Pharm GKB GenePA29091
Clinical trialH19
Cancer Resource (Charite)ENSG00000130600
Other databases
Probes
Litterature
PubMed91 Pubmed reference(s) in Entrez
CoreMineH19
iHOPH19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Mar 31 09:36:26 CEST 2014

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