Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

H1FX-AS1 (H1FX antisense RNA 1)

Identity

Alias (NCBI)C3orf47
HGNC (Hugo) H1FX-AS1
HGNC Alias symbFLJ34151
HGNC Previous nameC3orf47
HGNC Previous namechromosome 3 open reading frame 47
 H1FX antisense RNA 1 (non-protein coding)
LocusID (NCBI) 339942
Atlas_Id 78194
Location 3q21.3  [Link to chromosome band 3q21]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)H1FX-AS1   27953
Cards
Entrez_Gene (NCBI)H1FX-AS1  339942  H1FX antisense RNA 1
AliasesC3orf47
GeneCards (Weizmann)H1FX-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  H1FX-AS1 [Vega]
TCGA cBioPortalH1FX-AS1
AceView (NCBI)H1FX-AS1
Genatlas (Paris)H1FX-AS1
WikiGenes339942
SOURCE (Princeton)H1FX-AS1
Genetics Home Reference (NIH)H1FX-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)H1FX-AS1  -  
GoldenPath hg19 (UCSC)H1FX-AS1  -  
GoldenPathH1FX-AS1 - [CytoView hg19]  H1FX-AS1 - [CytoView hg38]
genome Data Viewer NCBIH1FX-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL040547 AL353963 BC093941 BC101739 BM709882
RefSeq transcript (Entrez)NM_001025468
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)H1FX-AS1
Gene ExpressionH1FX-AS1 [ NCBI-GEO ]   H1FX-AS1 [ EBI - ARRAY_EXPRESS ]   H1FX-AS1 [ SEEK ]   H1FX-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)H1FX-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of H1FX-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)339942
GTEX Portal (Tissue expression)H1FX-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)H1FX-AS1
DMDM Disease mutations339942
Blocks (Seattle)H1FX-AS1
HPRD18785
IPIIPI00402461   
Protein Interaction databases
BioGRIDH1FX-AS1
STRING (EMBL)H1FX-AS1
ZODIACH1FX-AS1
Ontologies - Pathways
Huge Navigator H1FX-AS1 [HugePedia]
snp3D : Map Gene to Disease339942
BioCentury BCIQH1FX-AS1
ClinGenH1FX-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD339942
Pharm GKB GenePA143485324
Clinical trialH1FX-AS1
Miscellaneous
canSAR (ICR)H1FX-AS1 (select the gene name)
HarmonizomeH1FX-AS1
DataMed IndexH1FX-AS1
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineH1FX-AS1
EVEXH1FX-AS1
GoPubMedH1FX-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:57:58 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.