Atlas of Genetics and Cytogenetics in Oncology and Haematology


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H3C4 (H3 clustered histone 4)

Identity

Alias (NCBI)H3/b
H3C1
H3C10
H3C11
H3C12
H3C2
H3C3
H3C6
H3C7
H3C8
H3FB
HIST1H3D
HGNC (Hugo) H3C4
HGNC Alias symbH3/b
HGNC Previous nameH3FB
 HIST1H3D
HGNC Previous nameH3 histone family, member B
 histone 1, H3d
 histone cluster 1, H3d
 histone cluster 1 H3 family member d
LocusID (NCBI) 8351
Atlas_Id 58131
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26196784 and ends at 26199293 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)H3C4   4767
Cards
Entrez_Gene (NCBI)H3C4    H3 clustered histone 4
AliasesH3/b; H3C1; H3C10; H3C11; 
H3C12; H3C2; H3C3; H3C6; H3C7; H3C8; H3FB; HIST1H3D
GeneCards (Weizmann)H3C4
Ensembl hg19 (Hinxton)ENSG00000197409 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197409 [Gene_View]  ENSG00000197409 [Sequence]  chr6:26196784-26199293 [Contig_View]  H3C4 [Vega]
ICGC DataPortalENSG00000197409
TCGA cBioPortalH3C4
AceView (NCBI)H3C4
Genatlas (Paris)H3C4
SOURCE (Princeton)H3C4
Genetics Home Reference (NIH)H3C4
Genomic and cartography
GoldenPath hg38 (UCSC)H3C4  -     chr6:26196784-26199293 -  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)H3C4  -     6p22.2   [Description]    (hg19-Feb_2009)
GoldenPathH3C4 - 6p22.2 [CytoView hg19]  H3C4 - 6p22.2 [CytoView hg38]
ImmunoBaseENSG00000197409
genome Data Viewer NCBIH3C4 [Mapview hg19]  
OMIM602811   
Gene and transcription
Genbank (Entrez)AK316611 BC031333 BQ051491 DB242999
RefSeq transcript (Entrez)NM_001376937 NM_003530
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)H3C4
Alternative Splicing GalleryENSG00000197409
Gene ExpressionH3C4 [ NCBI-GEO ]   H3C4 [ EBI - ARRAY_EXPRESS ]   H3C4 [ SEEK ]   H3C4 [ MEM ]
Gene Expression Viewer (FireBrowse)H3C4 [ Firebrowse - Broad ]
GenevisibleExpression of H3C4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8351
GTEX Portal (Tissue expression)H3C4
Human Protein AtlasENSG00000197409-H3C4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)H3C4
Blocks (Seattle)H3C4
Human Protein Atlas [tissue]ENSG00000197409-H3C4 [tissue]
Protein Interaction databases
BioGRIDH3C4
STRING (EMBL)H3C4
ZODIACH3C4
Ontologies - Pathways
Litterature
PubMed81 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXH3C4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:24:25 CET 2021

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