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HAO2-IT1 (HAO2 intronic transcript 1)

Identity

Alias_namesHAO2 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) HAO2-IT1
LocusID (NCBI) 100874270
Atlas_Id 64168
Location 1p12  [Link to chromosome band 1p12]
Location_base_pair Starts at 119368946 and ends at 119370330 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAO2-IT1   41342
Cards
Entrez_Gene (NCBI)HAO2-IT1  100874270  HAO2 intronic transcript 1
Aliases
GeneCards (Weizmann)HAO2-IT1
Ensembl hg19 (Hinxton)ENSG00000230921 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230921 [Gene_View]  chr1:119368946-119370330 [Contig_View]  HAO2-IT1 [Vega]
ICGC DataPortalENSG00000230921
TCGA cBioPortalHAO2-IT1
AceView (NCBI)HAO2-IT1
Genatlas (Paris)HAO2-IT1
WikiGenes100874270
SOURCE (Princeton)HAO2-IT1
Genetics Home Reference (NIH)HAO2-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)HAO2-IT1  -     chr1:119368946-119370330 +  1p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HAO2-IT1  -     1p12   [Description]    (hg19-Feb_2009)
EnsemblHAO2-IT1 - 1p12 [CytoView hg19]  HAO2-IT1 - 1p12 [CytoView hg38]
Mapping of homologs : NCBIHAO2-IT1 [Mapview hg19]  HAO2-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW300409
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HAO2-IT1
Alternative Splicing GalleryENSG00000230921
Gene ExpressionHAO2-IT1 [ NCBI-GEO ]   HAO2-IT1 [ EBI - ARRAY_EXPRESS ]   HAO2-IT1 [ SEEK ]   HAO2-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)HAO2-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874270
GTEX Portal (Tissue expression)HAO2-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAO2-IT1
DMDM Disease mutations100874270
Blocks (Seattle)HAO2-IT1
Human Protein AtlasENSG00000230921
Protein Interaction databases
FunCoupENSG00000230921
BioGRIDHAO2-IT1
STRING (EMBL)HAO2-IT1
ZODIACHAO2-IT1
Ontologies - Pathways
Huge Navigator HAO2-IT1 [HugePedia]
snp3D : Map Gene to Disease100874270
BioCentury BCIQHAO2-IT1
ClinGenHAO2-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874270
Clinical trialHAO2-IT1
Miscellaneous
canSAR (ICR)HAO2-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAO2-IT1
EVEXHAO2-IT1
GoPubMedHAO2-IT1
iHOPHAO2-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:16:57 CEST 2017

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