HAPLN3 (hyaluronan and proteoglycan link protein 3)

2010-12-01  

Identity

HGNC
HAPLN3
LOCATION
15q26.1
LOCUSID
145864
ALIAS
EXLD1,HsT19883
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 145864
HGNC: 21446
Ensembl: ENSG00000140511

Variants:

dbSNP: 145864
ClinVar: 145864
TCGA: ENSG00000140511
COSMIC: HAPLN3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000140511ENST00000359595Q96S86
ENSG00000140511ENST00000359595A0A024RC58
ENSG00000140511ENST00000558770H3BRY4
ENSG00000140511ENST00000562281H3BT26
ENSG00000140511ENST00000562889H3BTH8

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
100
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
314335122019A three-gene DNA methylation biomarker accurately classifies early stage prostate cancer.18
314335122019A three-gene DNA methylation biomarker accurately classifies early stage prostate cancer.18
209507962011Candidate gene analysis of the human natural killer-1 carbohydrate pathway and perineuronal nets in schizophrenia: B3GAT2 is associated with disease risk and cortical surface area.20
209507962011Candidate gene analysis of the human natural killer-1 carbohydrate pathway and perineuronal nets in schizophrenia: B3GAT2 is associated with disease risk and cortical surface area.20
206649842010Significant elevation of CLDN16 and HAPLN3 gene expression in human breast cancer.21
206649842010Significant elevation of CLDN16 and HAPLN3 gene expression in human breast cancer.21

Citation

Dessen P

HAPLN3 (hyaluronan and proteoglycan link protein 3)

Atlas Genet Cytogenet Oncol Haematol. 2010-12-01

Online version: http://atlasgeneticsoncology.org/gene/51792/hapln3