Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HAR1A (highly accelerated region 1A (non-protein coding))

Identity

Alias_nameshighly accelerated region 1A (non-protein-coding RNA)
Alias_symbol (synonym)HAR1F
NCRNA00064
LINC00064
Other alias
HGNC (Hugo) HAR1A
LocusID (NCBI) 768096
Atlas_Id 64169
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 61732644 and ends at 61735737 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAR1A   33117
Cards
Entrez_Gene (NCBI)HAR1A  768096  highly accelerated region 1A (non-protein coding)
AliasesHAR1F; LINC00064; NCRNA00064
GeneCards (Weizmann)HAR1A
Ensembl hg19 (Hinxton) [Gene_View]  chr20:61732644-61735737 [Contig_View]  HAR1A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:61732644-61735737 [Contig_View]  HAR1A [Vega]
TCGA cBioPortalHAR1A
AceView (NCBI)HAR1A
Genatlas (Paris)HAR1A
WikiGenes768096
SOURCE (Princeton)HAR1A
Genetics Home Reference (NIH)HAR1A
Genomic and cartography
GoldenPath hg19 (UCSC)HAR1A  -     chr20:61732644-61735737 +  20q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HAR1A  -     20q13.33   [Description]    (hg38-Dec_2013)
EnsemblHAR1A - 20q13.33 [CytoView hg19]  HAR1A - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIHAR1A [Mapview hg19]  HAR1A [Mapview hg38]
OMIM610556   
Gene and transcription
Genbank (Entrez)BC035016 BC047717 DQ860409 HG511539 HG975396
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929419
Consensus coding sequences : CCDS (NCBI)HAR1A
Cluster EST : UnigeneHs.549606 [ NCBI ]
CGAP (NCI)Hs.549606
Gene ExpressionHAR1A [ NCBI-GEO ]   HAR1A [ EBI - ARRAY_EXPRESS ]   HAR1A [ SEEK ]   HAR1A [ MEM ]
Gene Expression Viewer (FireBrowse)HAR1A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)768096
GTEX Portal (Tissue expression)HAR1A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAR1A
DMDM Disease mutations768096
Blocks (Seattle)HAR1A
Protein Interaction databases
BioGRIDHAR1A
STRING (EMBL)HAR1A
ZODIACHAR1A
Ontologies - Pathways
Huge Navigator HAR1A [HugePedia]
snp3D : Map Gene to Disease768096
BioCentury BCIQHAR1A
ClinGenHAR1A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD768096
Chemical/Pharm GKB GenePA162390575
Clinical trialHAR1A
Miscellaneous
canSAR (ICR)HAR1A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAR1A
EVEXHAR1A
GoPubMedHAR1A
iHOPHAR1A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:24 CET 2017

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