Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HAR1B (highly accelerated region 1B (non-protein coding))

Identity

Alias_nameshighly accelerated region 1B (non-protein-coding RNA)
Alias_symbol (synonym)HAR1R
NCRNA00065
LINC00065
Other alias
HGNC (Hugo) HAR1B
LocusID (NCBI) 768097
Atlas_Id 64170
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 61726845 and ends at 61733671 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAR1B   33118
Cards
Entrez_Gene (NCBI)HAR1B  768097  highly accelerated region 1B (non-protein coding)
AliasesHAR1R; LINC00065; NCRNA00065
GeneCards (Weizmann)HAR1B
Ensembl hg19 (Hinxton)ENSG00000231133 [Gene_View]  chr20:61726845-61733671 [Contig_View]  HAR1B [Vega]
Ensembl hg38 (Hinxton)ENSG00000231133 [Gene_View]  chr20:61726845-61733671 [Contig_View]  HAR1B [Vega]
ICGC DataPortalENSG00000231133
TCGA cBioPortalHAR1B
AceView (NCBI)HAR1B
Genatlas (Paris)HAR1B
WikiGenes768097
SOURCE (Princeton)HAR1B
Genetics Home Reference (NIH)HAR1B
Genomic and cartography
GoldenPath hg19 (UCSC)HAR1B  -     chr20:61726845-61733671 -  20q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HAR1B  -     20q13.33   [Description]    (hg38-Dec_2013)
EnsemblHAR1B - 20q13.33 [CytoView hg19]  HAR1B - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIHAR1B [Mapview hg19]  HAR1B [Mapview hg38]
OMIM610557   
Gene and transcription
Genbank (Entrez)DQ860410 DQ860411 HG511537 HG511538 HG975397
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929419
Consensus coding sequences : CCDS (NCBI)HAR1B
Cluster EST : UnigeneHs.635159 [ NCBI ]
CGAP (NCI)Hs.635159
Alternative Splicing GalleryENSG00000231133
Gene ExpressionHAR1B [ NCBI-GEO ]   HAR1B [ EBI - ARRAY_EXPRESS ]   HAR1B [ SEEK ]   HAR1B [ MEM ]
Gene Expression Viewer (FireBrowse)HAR1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)768097
GTEX Portal (Tissue expression)HAR1B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAR1B
DMDM Disease mutations768097
Blocks (Seattle)HAR1B
Human Protein AtlasENSG00000231133
Protein Interaction databases
FunCoupENSG00000231133
BioGRIDHAR1B
STRING (EMBL)HAR1B
ZODIACHAR1B
Ontologies - Pathways
Huge Navigator HAR1B [HugePedia]
snp3D : Map Gene to Disease768097
BioCentury BCIQHAR1B
ClinGenHAR1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD768097
Chemical/Pharm GKB GenePA162390576
Clinical trialHAR1B
Miscellaneous
canSAR (ICR)HAR1B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAR1B
EVEXHAR1B
GoPubMedHAR1B
iHOPHAR1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:24 CET 2017

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