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HAUS1 (HAUS augmin-like complex, subunit 1)

Identity

Alias_namesCCDC5
coiled-coil domain containing 5 (spindle associated)
Alias_symbol (synonym)HEI-C
HsT1461
FLJ40084
Other aliasHEIC
HGNC (Hugo) HAUS1
LocusID (NCBI) 115106
Atlas_Id 64173
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 43684298 and ends at 43708299 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
HAUS1 (18q21.1) / NEDD4L (18q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAUS1   25174
Cards
Entrez_Gene (NCBI)HAUS1  115106  HAUS augmin-like complex, subunit 1
AliasesCCDC5; HEI-C; HEIC; HsT1461
GeneCards (Weizmann)HAUS1
Ensembl hg19 (Hinxton)ENSG00000152240 [Gene_View]  chr18:43684298-43708299 [Contig_View]  HAUS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000152240 [Gene_View]  chr18:43684298-43708299 [Contig_View]  HAUS1 [Vega]
ICGC DataPortalENSG00000152240
TCGA cBioPortalHAUS1
AceView (NCBI)HAUS1
Genatlas (Paris)HAUS1
WikiGenes115106
SOURCE (Princeton)HAUS1
Genetics Home Reference (NIH)HAUS1
Genomic and cartography
GoldenPath hg19 (UCSC)HAUS1  -     chr18:43684298-43708299 +  18q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HAUS1  -     18q21.1   [Description]    (hg38-Dec_2013)
EnsemblHAUS1 - 18q21.1 [CytoView hg19]  HAUS1 - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIHAUS1 [Mapview hg19]  HAUS1 [Mapview hg38]
OMIM608775   
Gene and transcription
Genbank (Entrez)AK024747 AK097403 AK315605 AY360137 BC005958
RefSeq transcript (Entrez)NM_138443
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929410
Consensus coding sequences : CCDS (NCBI)HAUS1
Cluster EST : UnigeneHs.436617 [ NCBI ]
CGAP (NCI)Hs.436617
Alternative Splicing GalleryENSG00000152240
Gene ExpressionHAUS1 [ NCBI-GEO ]   HAUS1 [ EBI - ARRAY_EXPRESS ]   HAUS1 [ SEEK ]   HAUS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HAUS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115106
GTEX Portal (Tissue expression)HAUS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96CS2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96CS2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96CS2
Splice isoforms : SwissVarQ96CS2
PhosPhoSitePlusQ96CS2
Domains : Interpro (EBI)HAUS1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAUS1
DMDM Disease mutations115106
Blocks (Seattle)HAUS1
SuperfamilyQ96CS2
Human Protein AtlasENSG00000152240
Peptide AtlasQ96CS2
HPRD16385
IPIIPI00431082   IPI00431083   
Protein Interaction databases
DIP (DOE-UCLA)Q96CS2
IntAct (EBI)Q96CS2
FunCoupENSG00000152240
BioGRIDHAUS1
STRING (EMBL)HAUS1
ZODIACHAUS1
Ontologies - Pathways
QuickGOQ96CS2
Ontology : AmiGOspindle pole  molecular_function  protein binding  cytoplasm  centrosome  microtubule  mitotic nuclear division  spindle assembly  centrosome organization  cell division  HAUS complex  
Ontology : EGO-EBIspindle pole  molecular_function  protein binding  cytoplasm  centrosome  microtubule  mitotic nuclear division  spindle assembly  centrosome organization  cell division  HAUS complex  
NDEx NetworkHAUS1
Atlas of Cancer Signalling NetworkHAUS1
Wikipedia pathwaysHAUS1
Orthology - Evolution
OrthoDB115106
GeneTree (enSembl)ENSG00000152240
Phylogenetic Trees/Animal Genes : TreeFamHAUS1
HOVERGENQ96CS2
HOGENOMQ96CS2
Homologs : HomoloGeneHAUS1
Homology/Alignments : Family Browser (UCSC)HAUS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHAUS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HAUS1
dbVarHAUS1
ClinVarHAUS1
1000_GenomesHAUS1 
Exome Variant ServerHAUS1
ExAC (Exome Aggregation Consortium)HAUS1 (select the gene name)
Genetic variants : HAPMAP115106
Genomic Variants (DGV)HAUS1 [DGVbeta]
DECIPHER (Syndromes)18:43684298-43708299  ENSG00000152240
CONAN: Copy Number AnalysisHAUS1 
Mutations
ICGC Data PortalHAUS1 
TCGA Data PortalHAUS1 
Broad Tumor PortalHAUS1
OASIS PortalHAUS1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHAUS1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHAUS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HAUS1
DgiDB (Drug Gene Interaction Database)HAUS1
DoCM (Curated mutations)HAUS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HAUS1 (select a term)
intoGenHAUS1
Cancer3DHAUS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608775   
Orphanet
MedgenHAUS1
Genetic Testing Registry HAUS1
NextProtQ96CS2 [Medical]
TSGene115106
GENETestsHAUS1
Huge Navigator HAUS1 [HugePedia]
snp3D : Map Gene to Disease115106
BioCentury BCIQHAUS1
ClinGenHAUS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115106
Chemical/Pharm GKB GenePA165429013
Clinical trialHAUS1
Miscellaneous
canSAR (ICR)HAUS1 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAUS1
EVEXHAUS1
GoPubMedHAUS1
iHOPHAUS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:25 CET 2017

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