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HAUS5 (HAUS augmin like complex subunit 5)

Identity

Alias_namesKIAA0841
KIAA0841
Alias_symbol (synonym)dgt5
Other alias
HGNC (Hugo) HAUS5
LocusID (NCBI) 23354
Atlas_Id 64177
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35612744 and ends at 35625349 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HAUS5 (19q13.12) / HAUS5 (19q13.12)HNRNPDL (4q21.22) / HAUS5 (19q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAUS5   29130
Cards
Entrez_Gene (NCBI)HAUS5  23354  HAUS augmin like complex subunit 5
AliasesKIAA0841; dgt5
GeneCards (Weizmann)HAUS5
Ensembl hg19 (Hinxton)ENSG00000249115 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249115 [Gene_View]  chr19:35612744-35625349 [Contig_View]  HAUS5 [Vega]
ICGC DataPortalENSG00000249115
TCGA cBioPortalHAUS5
AceView (NCBI)HAUS5
Genatlas (Paris)HAUS5
WikiGenes23354
SOURCE (Princeton)HAUS5
Genetics Home Reference (NIH)HAUS5
Genomic and cartography
GoldenPath hg38 (UCSC)HAUS5  -     chr19:35612744-35625349 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HAUS5  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblHAUS5 - 19q13.12 [CytoView hg19]  HAUS5 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIHAUS5 [Mapview hg19]  HAUS5 [Mapview hg38]
OMIM613432   
Gene and transcription
Genbank (Entrez)AB020648 AK307703 BC013947 BC064390 BC157882
RefSeq transcript (Entrez)NM_015302
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HAUS5
Cluster EST : UnigeneHs.7426 [ NCBI ]
CGAP (NCI)Hs.7426
Alternative Splicing GalleryENSG00000249115
Gene ExpressionHAUS5 [ NCBI-GEO ]   HAUS5 [ EBI - ARRAY_EXPRESS ]   HAUS5 [ SEEK ]   HAUS5 [ MEM ]
Gene Expression Viewer (FireBrowse)HAUS5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23354
GTEX Portal (Tissue expression)HAUS5
Protein : pattern, domain, 3D structure
UniProt/SwissProtO94927   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO94927  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO94927
Splice isoforms : SwissVarO94927
PhosPhoSitePlusO94927
Domains : Interpro (EBI)HAUS5    HAUS5_metazoa   
Domain families : Pfam (Sanger)HAUS5 (PF14817)   
Domain families : Pfam (NCBI)pfam14817   
Conserved Domain (NCBI)HAUS5
DMDM Disease mutations23354
Blocks (Seattle)HAUS5
SuperfamilyO94927
Human Protein AtlasENSG00000249115
Peptide AtlasO94927
IPIIPI00014220   IPI00440233   
Protein Interaction databases
DIP (DOE-UCLA)O94927
IntAct (EBI)O94927
FunCoupENSG00000249115
BioGRIDHAUS5
STRING (EMBL)HAUS5
ZODIACHAUS5
Ontologies - Pathways
QuickGOO94927
Ontology : AmiGOG2/M transition of mitotic cell cycle  molecular_function  centrosome  spindle  cytosol  microtubule  centrosome cycle  spindle assembly  cell division  HAUS complex  ciliary basal body docking  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  molecular_function  centrosome  spindle  cytosol  microtubule  centrosome cycle  spindle assembly  cell division  HAUS complex  ciliary basal body docking  
NDEx NetworkHAUS5
Atlas of Cancer Signalling NetworkHAUS5
Wikipedia pathwaysHAUS5
Orthology - Evolution
OrthoDB23354
GeneTree (enSembl)ENSG00000249115
Phylogenetic Trees/Animal Genes : TreeFamHAUS5
HOVERGENO94927
HOGENOMO94927
Homologs : HomoloGeneHAUS5
Homology/Alignments : Family Browser (UCSC)HAUS5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHAUS5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HAUS5
dbVarHAUS5
ClinVarHAUS5
1000_GenomesHAUS5 
Exome Variant ServerHAUS5
ExAC (Exome Aggregation Consortium)HAUS5 (select the gene name)
Genetic variants : HAPMAP23354
Genomic Variants (DGV)HAUS5 [DGVbeta]
DECIPHERHAUS5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHAUS5 
Mutations
ICGC Data PortalHAUS5 
TCGA Data PortalHAUS5 
Broad Tumor PortalHAUS5
OASIS PortalHAUS5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHAUS5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHAUS5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HAUS5
DgiDB (Drug Gene Interaction Database)HAUS5
DoCM (Curated mutations)HAUS5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HAUS5 (select a term)
intoGenHAUS5
Cancer3DHAUS5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613432   
Orphanet
MedgenHAUS5
Genetic Testing Registry HAUS5
NextProtO94927 [Medical]
TSGene23354
GENETestsHAUS5
Target ValidationHAUS5
Huge Navigator HAUS5 [HugePedia]
snp3D : Map Gene to Disease23354
BioCentury BCIQHAUS5
ClinGenHAUS5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23354
Chemical/Pharm GKB GenePA165393415
Clinical trialHAUS5
Miscellaneous
canSAR (ICR)HAUS5 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAUS5
EVEXHAUS5
GoPubMedHAUS5
iHOPHAUS5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:15 CEST 2017

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