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HAUS6 (HAUS augmin like complex subunit 6)

Identity

Alias_namesFAM29A
family with sequence similarity 29, member A
Alias_symbol (synonym)FLJ20060
KIAA1574
dgt6
Other aliasDgt6
HGNC (Hugo) HAUS6
LocusID (NCBI) 54801
Atlas_Id 64178
Location 9p22.1  [Link to chromosome band 9p22]
Location_base_pair Starts at 19053137 and ends at 19102942 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HAUS6 (9p22.1) / PLIN2 (9p22.1)HAUS6 (9p22.1) / SLC39A8 (4q24)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HAUS6   25948
Cards
Entrez_Gene (NCBI)HAUS6  54801  HAUS augmin like complex subunit 6
AliasesDgt6; FAM29A
GeneCards (Weizmann)HAUS6
Ensembl hg19 (Hinxton)ENSG00000147874 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147874 [Gene_View]  chr9:19053137-19102942 [Contig_View]  HAUS6 [Vega]
ICGC DataPortalENSG00000147874
TCGA cBioPortalHAUS6
AceView (NCBI)HAUS6
Genatlas (Paris)HAUS6
WikiGenes54801
SOURCE (Princeton)HAUS6
Genetics Home Reference (NIH)HAUS6
Genomic and cartography
GoldenPath hg38 (UCSC)HAUS6  -     chr9:19053137-19102942 -  9p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HAUS6  -     9p22.1   [Description]    (hg19-Feb_2009)
EnsemblHAUS6 - 9p22.1 [CytoView hg19]  HAUS6 - 9p22.1 [CytoView hg38]
Mapping of homologs : NCBIHAUS6 [Mapview hg19]  HAUS6 [Mapview hg38]
OMIM613433   
Gene and transcription
Genbank (Entrez)AB046794 AF533709 AF537091 AK000067 AK022964
RefSeq transcript (Entrez)NM_001270890 NM_017645
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HAUS6
Cluster EST : UnigeneHs.533468 [ NCBI ]
CGAP (NCI)Hs.533468
Alternative Splicing GalleryENSG00000147874
Gene ExpressionHAUS6 [ NCBI-GEO ]   HAUS6 [ EBI - ARRAY_EXPRESS ]   HAUS6 [ SEEK ]   HAUS6 [ MEM ]
Gene Expression Viewer (FireBrowse)HAUS6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54801
GTEX Portal (Tissue expression)HAUS6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z4H7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z4H7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z4H7
Splice isoforms : SwissVarQ7Z4H7
PhosPhoSitePlusQ7Z4H7
Domains : Interpro (EBI)HAUS_6    HAUS_6_N   
Domain families : Pfam (Sanger)HAUS6_N (PF14661)   
Domain families : Pfam (NCBI)pfam14661   
Conserved Domain (NCBI)HAUS6
DMDM Disease mutations54801
Blocks (Seattle)HAUS6
SuperfamilyQ7Z4H7
Human Protein AtlasENSG00000147874
Peptide AtlasQ7Z4H7
HPRD13302
IPIIPI00719210   IPI00465253   IPI01008997   IPI00644873   IPI00647446   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z4H7
IntAct (EBI)Q7Z4H7
FunCoupENSG00000147874
BioGRIDHAUS6
STRING (EMBL)HAUS6
ZODIACHAUS6
Ontologies - Pathways
QuickGOQ7Z4H7
Ontology : AmiGOG2/M transition of mitotic cell cycle  molecular_function  centrosome  microtubule organizing center  spindle  cytosol  cytosol  microtubule  centrosome cycle  nuclear speck  spindle assembly  cell division  HAUS complex  ciliary basal body docking  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  molecular_function  centrosome  microtubule organizing center  spindle  cytosol  cytosol  microtubule  centrosome cycle  nuclear speck  spindle assembly  cell division  HAUS complex  ciliary basal body docking  
NDEx NetworkHAUS6
Atlas of Cancer Signalling NetworkHAUS6
Wikipedia pathwaysHAUS6
Orthology - Evolution
OrthoDB54801
GeneTree (enSembl)ENSG00000147874
Phylogenetic Trees/Animal Genes : TreeFamHAUS6
HOVERGENQ7Z4H7
HOGENOMQ7Z4H7
Homologs : HomoloGeneHAUS6
Homology/Alignments : Family Browser (UCSC)HAUS6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHAUS6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HAUS6
dbVarHAUS6
ClinVarHAUS6
1000_GenomesHAUS6 
Exome Variant ServerHAUS6
ExAC (Exome Aggregation Consortium)HAUS6 (select the gene name)
Genetic variants : HAPMAP54801
Genomic Variants (DGV)HAUS6 [DGVbeta]
DECIPHERHAUS6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHAUS6 
Mutations
ICGC Data PortalHAUS6 
TCGA Data PortalHAUS6 
Broad Tumor PortalHAUS6
OASIS PortalHAUS6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHAUS6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHAUS6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)TBsLVD Tuberculosis susceptibility Locus Variation Database
BioMutasearch HAUS6
DgiDB (Drug Gene Interaction Database)HAUS6
DoCM (Curated mutations)HAUS6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HAUS6 (select a term)
intoGenHAUS6
Cancer3DHAUS6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613433   
Orphanet
MedgenHAUS6
Genetic Testing Registry HAUS6
NextProtQ7Z4H7 [Medical]
TSGene54801
GENETestsHAUS6
Target ValidationHAUS6
Huge Navigator HAUS6 [HugePedia]
snp3D : Map Gene to Disease54801
BioCentury BCIQHAUS6
ClinGenHAUS6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54801
Chemical/Pharm GKB GenePA165585815
Clinical trialHAUS6
Miscellaneous
canSAR (ICR)HAUS6 (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHAUS6
EVEXHAUS6
GoPubMedHAUS6
iHOPHAUS6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:10:15 CEST 2017

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