Atlas of Genetics and Cytogenetics in Oncology and Haematology

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HAVCR1P1 (hepatitis A virus cellular receptor 1 pseudogene 1)

Identity

Alias (NCBI)-
HGNC (Hugo) HAVCR1P1
LocusID (NCBI) 100101266
Atlas_Id 64180
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 24162193 and ends at 24163447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HAVCR1P1   44033
Cards
Entrez_Gene (NCBI)HAVCR1P1    hepatitis A virus cellular receptor 1 pseudogene 1
Aliases
GeneCards (Weizmann)HAVCR1P1
Ensembl hg19 (Hinxton)ENSG00000268442 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268442 [Gene_View]  ENSG00000268442 [Sequence]  chr19:24162193-24163447 [Contig_View]  HAVCR1P1 [Vega]
ICGC DataPortalENSG00000268442
TCGA cBioPortalHAVCR1P1
AceView (NCBI)HAVCR1P1
Genatlas (Paris)HAVCR1P1
SOURCE (Princeton)HAVCR1P1
Genetics Home Reference (NIH)HAVCR1P1
Genomic and cartography
GoldenPath hg38 (UCSC)HAVCR1P1  -     chr19:24162193-24163447 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HAVCR1P1  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathHAVCR1P1 - 19p12 [CytoView hg19]  HAVCR1P1 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000268442
Genome Data Viewer NCBIHAVCR1P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI283084 BX114328
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)HAVCR1P1
Gene ExpressionHAVCR1P1 [ NCBI-GEO ]   HAVCR1P1 [ EBI - ARRAY_EXPRESS ]   HAVCR1P1 [ SEEK ]   HAVCR1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)HAVCR1P1 [ Firebrowse - Broad ]
GenevisibleExpression of HAVCR1P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100101266
GTEX Portal (Tissue expression)HAVCR1P1
Human Protein AtlasENSG00000268442-HAVCR1P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HAVCR1P1
Human Protein Atlas [tissue]ENSG00000268442-HAVCR1P1 [tissue]
Protein Interaction databases
BioGRIDHAVCR1P1
STRING (EMBL)HAVCR1P1
ZODIACHAVCR1P1
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXHAVCR1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 13:21:39 CET 2022
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