Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HBB (hemoglobin subunit beta)

Identity

Alias (NCBI)CD113t-C
ECYT6
beta-globin
HGNC (Hugo) HBB
HGNC Alias symbCD113t-C
beta-globin
HGNC Previous namehemoglobin, beta
LocusID (NCBI) 3043
Atlas_Id 45833
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5225464 and ends at 5227071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HBB (11p15.4)::HBB (11p15.4)HBB (11p15.4)::LRRC2 (3p21.31)HBB (11p15.4)::RNH1 (11p15.5)
HBB (11p15.4)::TCEANC2 (1p32.3)HBB (11p15.4)::ZMIZ2 (7p13)MOGS (2p13.1)::HBB (11p15.4)
RPLP2 (11p15.5)::HBB (11p15.4)UGT3A2 (5p13.2)::HBB (11p15.4)ZDHHC20 (13q12.11)::HBB (11p15.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)HBB   4827
LRG (Locus Reference Genomic)LRG_1232
Cards
Entrez_Gene (NCBI)HBB    hemoglobin subunit beta
AliasesCD113t-C; ECYT6; beta-globin
GeneCards (Weizmann)HBB
Ensembl hg19 (Hinxton)ENSG00000244734 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244734 [Gene_View]  ENSG00000244734 [Sequence]  chr11:5225464-5227071 [Contig_View]  HBB [Vega]
ICGC DataPortalENSG00000244734
TCGA cBioPortalHBB
AceView (NCBI)HBB
Genatlas (Paris)HBB
SOURCE (Princeton)HBB
Genetics Home Reference (NIH)HBB
Genomic and cartography
GoldenPath hg38 (UCSC)HBB  -     chr11:5225464-5227071 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HBB  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathHBB - 11p15.4 [CytoView hg19]  HBB - 11p15.4 [CytoView hg38]
ImmunoBaseENSG00000244734
Genome Data Viewer NCBIHBB [Mapview hg19]  
OMIM140700   141749   141900   603902   603903   604131   611162   613985   617971   617980   
Gene and transcription
Genbank (Entrez)AF117710 AF181832 AF181989 AF349114 AK311825
RefSeq transcript (Entrez)NM_000518
Consensus coding sequences : CCDS (NCBI)HBB
Gene ExpressionHBB [ NCBI-GEO ]   HBB [ EBI - ARRAY_EXPRESS ]   HBB [ SEEK ]   HBB [ MEM ]
Gene Expression Viewer (FireBrowse)HBB [ Firebrowse - Broad ]
GenevisibleExpression of HBB in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3043
GTEX Portal (Tissue expression)HBB
Human Protein AtlasENSG00000244734-HBB [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HBB
Human Protein Atlas [tissue]ENSG00000244734-HBB [tissue]
HPRD00786
Protein Interaction databases
BioGRIDHBB
STRING (EMBL)HBB
ZODIACHBB
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXHBB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 20 12:36:34 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.