Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HBD (hypophosphatemic bone disease)

Identity

Alias_nameshemoglobin, delta
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100187828
Atlas_Id 64183
Location -  [Link to chromosome band ]

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HBD  100187828  hypophosphatemic bone disease
Aliases
GeneCards (Weizmann)HBD
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  HBD [Vega]
TCGA cBioPortalHBD
AceView (NCBI)HBD
Genatlas (Paris)HBD
WikiGenes100187828
SOURCE (Princeton)HBD
Genetics Home Reference (NIH)HBD
Genomic and cartography
GoldenPath hg38 (UCSC)HBD  -  
GoldenPath hg19 (UCSC)HBD  -  
EnsemblHBD - [CytoView hg19]  HBD - [CytoView hg38]
Mapping of homologs : NCBIHBD [Mapview hg19]  HBD [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HBD
Gene ExpressionHBD [ NCBI-GEO ]   HBD [ EBI - ARRAY_EXPRESS ]   HBD [ SEEK ]   HBD [ MEM ]
Gene Expression Viewer (FireBrowse)HBD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100187828
GTEX Portal (Tissue expression)HBD
Protein : pattern, domain, 3D structure
UniProt/SwissProtP02042   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP02042  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP02042
Splice isoforms : SwissVarP02042
PhosPhoSitePlusP02042
Domaine pattern : Prosite (Expaxy)GLOBIN (PS01033)   
Domains : Interpro (EBI)Globin    Globin-like    Globin/Proto    Haemoglobin_b   
Domain families : Pfam (Sanger)Globin (PF00042)   
Domain families : Pfam (NCBI)pfam00042   
Conserved Domain (NCBI)HBD
DMDM Disease mutations100187828
Blocks (Seattle)HBD
PDB (SRS)1SHR    1SI4   
PDB (PDBSum)1SHR    1SI4   
PDB (IMB)1SHR    1SI4   
PDB (RSDB)1SHR    1SI4   
Structural Biology KnowledgeBase1SHR    1SI4   
SCOP (Structural Classification of Proteins)1SHR    1SI4   
CATH (Classification of proteins structures)1SHR    1SI4   
SuperfamilyP02042
Peptide AtlasP02042
Protein Interaction databases
DIP (DOE-UCLA)P02042
IntAct (EBI)P02042
BioGRIDHBD
STRING (EMBL)HBD
ZODIACHBD
Ontologies - Pathways
QuickGOP02042
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkHBD
Atlas of Cancer Signalling NetworkHBD
Wikipedia pathwaysHBD
Orthology - Evolution
OrthoDB100187828
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENP02042
HOGENOMP02042
Homologs : HomoloGeneHBD
Homology/Alignments : Family Browser (UCSC)HBD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHBD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HBD
dbVarHBD
ClinVarHBD
1000_GenomesHBD 
Exome Variant ServerHBD
ExAC (Exome Aggregation Consortium)HBD (select the gene name)
Genetic variants : HAPMAP100187828
Genomic Variants (DGV)HBD [DGVbeta]
DECIPHERHBD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHBD 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHBD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMD-
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)The Globin Gene Server
BioMutasearch HBD
DgiDB (Drug Gene Interaction Database)HBD
DoCM (Curated mutations)HBD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HBD (select a term)
intoGenHBD
Cancer3DHBD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet19175    21962   
MedgenHBD
Genetic Testing Registry HBD
NextProtP02042 [Medical]
TSGene100187828
GENETestsHBD
Target ValidationHBD
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100187828
BioCentury BCIQHBD
ClinGenHBD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100187828
Clinical trialHBD
Miscellaneous
canSAR (ICR)HBD (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHBD
EVEXHBD
GoPubMedHBD
iHOPHBD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:10:16 CEST 2017

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