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HCG14 (HLA complex group 14 (non-protein coding))

Identity

Alias_namesHLA complex group 14
Alias_symbol (synonym)dJ111M5.4
Other alias
HGNC (Hugo) HCG14
LocusID (NCBI) 414760
Atlas_Id 64196
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 28896530 and ends at 28897320 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HCG14   18323
Cards
Entrez_Gene (NCBI)HCG14  414760  HLA complex group 14 (non-protein coding)
AliasesdJ111M5.4
GeneCards (Weizmann)HCG14
Ensembl hg19 (Hinxton)ENSG00000224157 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224157 [Gene_View]  ENSG00000224157 [Sequence]  chr6:28896530-28897320 [Contig_View]  HCG14 [Vega]
ICGC DataPortalENSG00000224157
TCGA cBioPortalHCG14
AceView (NCBI)HCG14
Genatlas (Paris)HCG14
WikiGenes414760
SOURCE (Princeton)HCG14
Genetics Home Reference (NIH)HCG14
Genomic and cartography
GoldenPath hg38 (UCSC)HCG14  -     chr6:28896530-28897320 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HCG14  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblHCG14 - 6p22.1 [CytoView hg19]  HCG14 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIHCG14 [Mapview hg19]  HCG14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI859157 AW270927
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)HCG14
Cluster EST : UnigeneHs.211005 [ NCBI ]
CGAP (NCI)Hs.211005
Alternative Splicing GalleryENSG00000224157
Gene ExpressionHCG14 [ NCBI-GEO ]   HCG14 [ EBI - ARRAY_EXPRESS ]   HCG14 [ SEEK ]   HCG14 [ MEM ]
Gene Expression Viewer (FireBrowse)HCG14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)414760
GTEX Portal (Tissue expression)HCG14
Human Protein AtlasENSG00000224157-HCG14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HCG14
DMDM Disease mutations414760
Blocks (Seattle)HCG14
Human Protein Atlas [tissue]ENSG00000224157-HCG14 [tissue]
Protein Interaction databases
FunCoupENSG00000224157
BioGRIDHCG14
STRING (EMBL)HCG14
ZODIACHCG14
Ontologies - Pathways
Huge Navigator HCG14 [HugePedia]
snp3D : Map Gene to Disease414760
BioCentury BCIQHCG14
ClinGenHCG14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414760
Chemical/Pharm GKB GenePA134898948
Clinical trialHCG14
Miscellaneous
canSAR (ICR)HCG14 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHCG14
EVEXHCG14
GoPubMedHCG14
iHOPHCG14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:48:36 CEST 2018

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