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HCG20 (HLA complex group 20 (non-protein coding))

Identity

Other aliasNCRNA00149
HGNC (Hugo) HCG20
LocusID (NCBI) 105375013
Atlas_Id 78672
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30734602 and ends at 30760027 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HCG20   31334
Cards
Entrez_Gene (NCBI)HCG20  105375013  HLA complex group 20 (non-protein coding)
AliasesNCRNA00149
GeneCards (Weizmann)HCG20
Ensembl hg19 (Hinxton) [Gene_View]  chr6:30734602-30760027 [Contig_View]  HCG20 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:30734602-30760027 [Contig_View]  HCG20 [Vega]
TCGA cBioPortalHCG20
AceView (NCBI)HCG20
Genatlas (Paris)HCG20
WikiGenes105375013
SOURCE (Princeton)HCG20
Genetics Home Reference (NIH)HCG20
Genomic and cartography
GoldenPath hg19 (UCSC)HCG20  -     chr6:30734602-30760027 +  6p21.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HCG20  -     6p21.33   [Description]    (hg38-Dec_2013)
EnsemblHCG20 - 6p21.33 [CytoView hg19]  HCG20 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIHCG20 [Mapview hg19]  HCG20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF571832 BM995184 HG499126 HG499127
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_167245 NT_167246 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)HCG20
Cluster EST : UnigeneHs.348584 [ NCBI ]
CGAP (NCI)Hs.348584
Gene ExpressionHCG20 [ NCBI-GEO ]   HCG20 [ EBI - ARRAY_EXPRESS ]   HCG20 [ SEEK ]   HCG20 [ MEM ]
Gene Expression Viewer (FireBrowse)HCG20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375013
GTEX Portal (Tissue expression)HCG20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HCG20
DMDM Disease mutations105375013
Blocks (Seattle)HCG20
Protein Interaction databases
BioGRIDHCG20
STRING (EMBL)HCG20
ZODIACHCG20
Ontologies - Pathways
Huge Navigator HCG20 [HugePedia]
snp3D : Map Gene to Disease105375013
BioCentury BCIQHCG20
ClinGenHCG20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375013
Clinical trialHCG20
Miscellaneous
canSAR (ICR)HCG20 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHCG20
EVEXHCG20
GoPubMedHCG20
iHOPHCG20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:07:30 CET 2017

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