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HCG2040054 (uncharacterized LOC644093)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 644093
Atlas_Id 64199
Location 2p16.3  [Link to chromosome band 2p16]
Location_base_pair Starts at 47527537 and ends at 47529164 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HCG2040054  644093  uncharacterized LOC644093
Aliases
GeneCards (Weizmann)HCG2040054
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:47527537-47529164 [Contig_View]  HCG2040054 [Vega]
TCGA cBioPortalHCG2040054
AceView (NCBI)HCG2040054
Genatlas (Paris)HCG2040054
WikiGenes644093
SOURCE (Princeton)HCG2040054
Genetics Home Reference (NIH)HCG2040054
Genomic and cartography
GoldenPath hg38 (UCSC)HCG2040054  -     chr2:47527537-47529164 +  2p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HCG2040054  -     2p16.3   [Description]    (hg19-Feb_2009)
EnsemblHCG2040054 - 2p16.3 [CytoView hg19]  HCG2040054 - 2p16.3 [CytoView hg38]
Mapping of homologs : NCBIHCG2040054 [Mapview hg19]  HCG2040054 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI032330 AI150334
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HCG2040054
Cluster EST : UnigeneHs.734158 [ NCBI ]
CGAP (NCI)Hs.734158
Gene ExpressionHCG2040054 [ NCBI-GEO ]   HCG2040054 [ EBI - ARRAY_EXPRESS ]   HCG2040054 [ SEEK ]   HCG2040054 [ MEM ]
Gene Expression Viewer (FireBrowse)HCG2040054 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644093
GTEX Portal (Tissue expression)HCG2040054
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HCG2040054
DMDM Disease mutations644093
Blocks (Seattle)HCG2040054
Protein Interaction databases
BioGRIDHCG2040054
STRING (EMBL)HCG2040054
ZODIACHCG2040054
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease644093
BioCentury BCIQHCG2040054
ClinGenHCG2040054
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644093
Clinical trialHCG2040054
Miscellaneous
canSAR (ICR)HCG2040054 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHCG2040054
EVEXHCG2040054
GoPubMedHCG2040054
iHOPHCG2040054
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:45:52 CET 2017

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