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HCG21 (HLA complex group 21 (non-protein coding))

Identity

Other aliasNCRNA00150
HGNC (Hugo) HCG21
LocusID (NCBI) 102723346
Atlas_Id 78734
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30945979 and ends at 30954862 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HCG21   31335
Cards
Entrez_Gene (NCBI)HCG21  102723346  HLA complex group 21 (non-protein coding)
AliasesNCRNA00150
GeneCards (Weizmann)HCG21
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:30945979-30954862 [Contig_View]  HCG21 [Vega]
TCGA cBioPortalHCG21
AceView (NCBI)HCG21
Genatlas (Paris)HCG21
WikiGenes102723346
SOURCE (Princeton)HCG21
Genetics Home Reference (NIH)HCG21
Genomic and cartography
GoldenPath hg38 (UCSC)HCG21  -     chr6:30945979-30954862 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HCG21  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblHCG21 - 6p21.33 [CytoView hg19]  HCG21 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIHCG21 [Mapview hg19]  HCG21 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167248
Consensus coding sequences : CCDS (NCBI)HCG21
Gene ExpressionHCG21 [ NCBI-GEO ]   HCG21 [ EBI - ARRAY_EXPRESS ]   HCG21 [ SEEK ]   HCG21 [ MEM ]
Gene Expression Viewer (FireBrowse)HCG21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723346
GTEX Portal (Tissue expression)HCG21
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HCG21
DMDM Disease mutations102723346
Blocks (Seattle)HCG21
Protein Interaction databases
BioGRIDHCG21
STRING (EMBL)HCG21
ZODIACHCG21
Ontologies - Pathways
Huge Navigator HCG21 [HugePedia]
snp3D : Map Gene to Disease102723346
BioCentury BCIQHCG21
ClinGenHCG21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723346
Clinical trialHCG21
Miscellaneous
canSAR (ICR)HCG21 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHCG21
EVEXHCG21
GoPubMedHCG21
iHOPHCG21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:10:18 CEST 2017

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