Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HDAC11-AS1 (HDAC11 antisense RNA 1)

Identity

Alias_namesHDAC11 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) HDAC11-AS1
LocusID (NCBI) 100874101
Atlas_Id 64213
Location 3p25.1  [Link to chromosome band 3p25]
Location_base_pair Starts at 13476988 and ends at 13480053 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HDAC11-AS1   40868
Cards
Entrez_Gene (NCBI)HDAC11-AS1  100874101  HDAC11 antisense RNA 1
Aliases
GeneCards (Weizmann)HDAC11-AS1
Ensembl hg19 (Hinxton)ENSG00000244502 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244502 [Gene_View]  chr3:13476988-13480053 [Contig_View]  HDAC11-AS1 [Vega]
ICGC DataPortalENSG00000244502
TCGA cBioPortalHDAC11-AS1
AceView (NCBI)HDAC11-AS1
Genatlas (Paris)HDAC11-AS1
WikiGenes100874101
SOURCE (Princeton)HDAC11-AS1
Genetics Home Reference (NIH)HDAC11-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)HDAC11-AS1  -     chr3:13476988-13480053 -  3p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HDAC11-AS1  -     3p25.1   [Description]    (hg19-Feb_2009)
EnsemblHDAC11-AS1 - 3p25.1 [CytoView hg19]  HDAC11-AS1 - 3p25.1 [CytoView hg38]
Mapping of homologs : NCBIHDAC11-AS1 [Mapview hg19]  HDAC11-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX104155
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HDAC11-AS1
Cluster EST : UnigeneHs.535701 [ NCBI ]
CGAP (NCI)Hs.535701
Alternative Splicing GalleryENSG00000244502
Gene ExpressionHDAC11-AS1 [ NCBI-GEO ]   HDAC11-AS1 [ EBI - ARRAY_EXPRESS ]   HDAC11-AS1 [ SEEK ]   HDAC11-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HDAC11-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874101
GTEX Portal (Tissue expression)HDAC11-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HDAC11-AS1
DMDM Disease mutations100874101
Blocks (Seattle)HDAC11-AS1
Human Protein AtlasENSG00000244502
Protein Interaction databases
FunCoupENSG00000244502
BioGRIDHDAC11-AS1
STRING (EMBL)HDAC11-AS1
ZODIACHDAC11-AS1
Ontologies - Pathways
Huge Navigator HDAC11-AS1 [HugePedia]
snp3D : Map Gene to Disease100874101
BioCentury BCIQHDAC11-AS1
ClinGenHDAC11-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874101
Clinical trialHDAC11-AS1
Miscellaneous
canSAR (ICR)HDAC11-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHDAC11-AS1
EVEXHDAC11-AS1
GoPubMedHDAC11-AS1
iHOPHDAC11-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:52:07 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.