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HDAC2-AS2 (HDAC2 and HS3ST5 antisense RNA 2)

Identity

Alias_symbol (synonym)ENST00000421891
Other alias-
HGNC (Hugo) HDAC2-AS2
LocusID (NCBI) 101927768
Atlas_Id 80128
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 113969701 and ends at 114340729 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HDAC2-AS2   43590
Cards
Entrez_Gene (NCBI)HDAC2-AS2  101927768  HDAC2 and HS3ST5 antisense RNA 2
Aliases
GeneCards (Weizmann)HDAC2-AS2
Ensembl hg19 (Hinxton)ENSG00000228624 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228624 [Gene_View]  ENSG00000228624 [Sequence]  chr6:113969701-114340729 [Contig_View]  HDAC2-AS2 [Vega]
ICGC DataPortalENSG00000228624
TCGA cBioPortalHDAC2-AS2
AceView (NCBI)HDAC2-AS2
Genatlas (Paris)HDAC2-AS2
WikiGenes101927768
SOURCE (Princeton)HDAC2-AS2
Genetics Home Reference (NIH)HDAC2-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)HDAC2-AS2  -     chr6:113969701-114340729 +  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HDAC2-AS2  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblHDAC2-AS2 - 6q21 [CytoView hg19]  HDAC2-AS2 - 6q21 [CytoView hg38]
Mapping of homologs : NCBIHDAC2-AS2 [Mapview hg19]  HDAC2-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042098 BX113840 CD643945
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HDAC2-AS2
Cluster EST : UnigeneHs.733957 [ NCBI ]
CGAP (NCI)Hs.733957
Alternative Splicing GalleryENSG00000228624
Gene ExpressionHDAC2-AS2 [ NCBI-GEO ]   HDAC2-AS2 [ EBI - ARRAY_EXPRESS ]   HDAC2-AS2 [ SEEK ]   HDAC2-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)HDAC2-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927768
GTEX Portal (Tissue expression)HDAC2-AS2
Human Protein AtlasENSG00000228624-HDAC2-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HDAC2-AS2
DMDM Disease mutations101927768
Blocks (Seattle)HDAC2-AS2
Human Protein Atlas [tissue]ENSG00000228624-HDAC2-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000228624
BioGRIDHDAC2-AS2
STRING (EMBL)HDAC2-AS2
ZODIACHDAC2-AS2
Ontologies - Pathways
Huge Navigator HDAC2-AS2 [HugePedia]
snp3D : Map Gene to Disease101927768
BioCentury BCIQHDAC2-AS2
ClinGenHDAC2-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927768
Clinical trialHDAC2-AS2
Miscellaneous
canSAR (ICR)HDAC2-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHDAC2-AS2
EVEXHDAC2-AS2
GoPubMedHDAC2-AS2
iHOPHDAC2-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:48:41 CEST 2018

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