Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HECTD2-AS1 (HECTD2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) HECTD2-AS1
LocusID (NCBI) 100188947
Atlas_Id 64228
Location 10q23.32  [Link to chromosome band 10q23]
Location_base_pair Starts at 91306962 and ends at 91611460 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HECTD2-AS1   48679
Cards
Entrez_Gene (NCBI)HECTD2-AS1  100188947  HECTD2 antisense RNA 1
Aliases
GeneCards (Weizmann)HECTD2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:91306962-91611460 [Contig_View]  HECTD2-AS1 [Vega]
TCGA cBioPortalHECTD2-AS1
AceView (NCBI)HECTD2-AS1
Genatlas (Paris)HECTD2-AS1
WikiGenes100188947
SOURCE (Princeton)HECTD2-AS1
Genetics Home Reference (NIH)HECTD2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)HECTD2-AS1  -     chr10:91306962-91611460 -  10q23.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HECTD2-AS1  -     10q23.32   [Description]    (hg19-Feb_2009)
EnsemblHECTD2-AS1 - 10q23.32 [CytoView hg19]  HECTD2-AS1 - 10q23.32 [CytoView hg38]
Mapping of homologs : NCBIHECTD2-AS1 [Mapview hg19]  HECTD2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA211589 BQ182529 DA898704
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HECTD2-AS1
Cluster EST : UnigeneHs.535293 [ NCBI ]
CGAP (NCI)Hs.535293
Gene ExpressionHECTD2-AS1 [ NCBI-GEO ]   HECTD2-AS1 [ EBI - ARRAY_EXPRESS ]   HECTD2-AS1 [ SEEK ]   HECTD2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HECTD2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100188947
GTEX Portal (Tissue expression)HECTD2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HECTD2-AS1
DMDM Disease mutations100188947
Blocks (Seattle)HECTD2-AS1
Protein Interaction databases
BioGRIDHECTD2-AS1
STRING (EMBL)HECTD2-AS1
ZODIACHECTD2-AS1
Ontologies - Pathways
Huge Navigator HECTD2-AS1 [HugePedia]
snp3D : Map Gene to Disease100188947
BioCentury BCIQHECTD2-AS1
ClinGenHECTD2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100188947
Clinical trialHECTD2-AS1
Miscellaneous
canSAR (ICR)HECTD2-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHECTD2-AS1
EVEXHECTD2-AS1
GoPubMedHECTD2-AS1
iHOPHECTD2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:21:09 CET 2018
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.