Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HECW1-IT1 (HECW1 intronic transcript 1)

Identity

Alias_namesHECW1 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) HECW1-IT1
LocusID (NCBI) 100127950
Atlas_Id 64230
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 43157495 and ends at 43202786 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HECW1-IT1   41465
Cards
Entrez_Gene (NCBI)HECW1-IT1  100127950  HECW1 intronic transcript 1
Aliases
GeneCards (Weizmann)HECW1-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:43157495-43202786 [Contig_View]  HECW1-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:43157495-43202786 [Contig_View]  HECW1-IT1 [Vega]
TCGA cBioPortalHECW1-IT1
AceView (NCBI)HECW1-IT1
Genatlas (Paris)HECW1-IT1
WikiGenes100127950
SOURCE (Princeton)HECW1-IT1
Genetics Home Reference (NIH)HECW1-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)HECW1-IT1  -     chr7:43157495-43202786 +  7p14.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HECW1-IT1  -     7p14.1   [Description]    (hg38-Dec_2013)
EnsemblHECW1-IT1 - 7p14.1 [CytoView hg19]  HECW1-IT1 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBIHECW1-IT1 [Mapview hg19]  HECW1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093262 HG500215
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)HECW1-IT1
Cluster EST : UnigeneHs.666610 [ NCBI ]
CGAP (NCI)Hs.666610
Gene ExpressionHECW1-IT1 [ NCBI-GEO ]   HECW1-IT1 [ EBI - ARRAY_EXPRESS ]   HECW1-IT1 [ SEEK ]   HECW1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)HECW1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100127950
GTEX Portal (Tissue expression)HECW1-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HECW1-IT1
DMDM Disease mutations100127950
Blocks (Seattle)HECW1-IT1
IPIIPI00167890   
Protein Interaction databases
BioGRIDHECW1-IT1
STRING (EMBL)HECW1-IT1
ZODIACHECW1-IT1
Ontologies - Pathways
Huge Navigator HECW1-IT1 [HugePedia]
snp3D : Map Gene to Disease100127950
BioCentury BCIQHECW1-IT1
ClinGenHECW1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100127950
Clinical trialHECW1-IT1
Miscellaneous
canSAR (ICR)HECW1-IT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHECW1-IT1
EVEXHECW1-IT1
GoPubMedHECW1-IT1
iHOPHECW1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:36 CET 2017

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