Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HEIH (hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA)

Identity

Alias_symbol (synonym)LINC-HEIH
lncRNA-HEIH
LINC00848
HCCAT2
Other alias
HGNC (Hugo) HEIH
LocusID (NCBI) 100859930
Atlas_Id 53332
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 180256954 and ends at 180258618 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HEIH   45049
Cards
Entrez_Gene (NCBI)HEIH  100859930  hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA
AliasesHCCAT2; LINC-HEIH; LINC00848; lncRNA-HEIH
GeneCards (Weizmann)HEIH
Ensembl hg19 (Hinxton)ENSG00000278970 [Gene_View]  chr5:180256954-180258618 [Contig_View]  HEIH [Vega]
Ensembl hg38 (Hinxton)ENSG00000278970 [Gene_View]  chr5:180256954-180258618 [Contig_View]  HEIH [Vega]
ICGC DataPortalENSG00000278970
TCGA cBioPortalHEIH
AceView (NCBI)HEIH
Genatlas (Paris)HEIH
WikiGenes100859930
SOURCE (Princeton)HEIH
Genetics Home Reference (NIH)HEIH
Genomic and cartography
GoldenPath hg19 (UCSC)HEIH  -     chr5:180256954-180258618 -  5q35.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HEIH  -     5q35.3   [Description]    (hg38-Dec_2013)
EnsemblHEIH - 5q35.3 [CytoView hg19]  HEIH - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIHEIH [Mapview hg19]  HEIH [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026101 BC009038 BC011459 BC019622 BC021206
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)HEIH
Cluster EST : UnigeneHs.655606 [ NCBI ]
CGAP (NCI)Hs.655606
Alternative Splicing GalleryENSG00000278970
Gene ExpressionHEIH [ NCBI-GEO ]   HEIH [ EBI - ARRAY_EXPRESS ]   HEIH [ SEEK ]   HEIH [ MEM ]
Gene Expression Viewer (FireBrowse)HEIH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100859930
GTEX Portal (Tissue expression)HEIH
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HEIH
DMDM Disease mutations100859930
Blocks (Seattle)HEIH
Human Protein AtlasENSG00000278970
Protein Interaction databases
FunCoupENSG00000278970
BioGRIDHEIH
STRING (EMBL)HEIH
ZODIACHEIH
Ontologies - Pathways
Huge Navigator HEIH [HugePedia]
snp3D : Map Gene to Disease100859930
BioCentury BCIQHEIH
ClinGenHEIH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100859930
Clinical trialHEIH
Miscellaneous
canSAR (ICR)HEIH (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHEIH
EVEXHEIH
GoPubMedHEIH
iHOPHEIH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:03:34 CEST 2017

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