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HEMGN (hemogen)

Identity

Alias_symbol (synonym)EDAG
CT155
NDR
Other aliasEDAG-1
HGNC (Hugo) HEMGN
LocusID (NCBI) 55363
Atlas_Id 45870
Location 9q22.33  [Link to chromosome band 9q22]
Location_base_pair Starts at 100689073 and ends at 100707197 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
INS-IGF2 (11p15.5) / HEMGN (9q22.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HEMGN   17509
Cards
Entrez_Gene (NCBI)HEMGN  55363  hemogen
AliasesCT155; EDAG; EDAG-1; NDR
GeneCards (Weizmann)HEMGN
Ensembl hg19 (Hinxton)ENSG00000136929 [Gene_View]  chr9:100689073-100707197 [Contig_View]  HEMGN [Vega]
Ensembl hg38 (Hinxton)ENSG00000136929 [Gene_View]  chr9:100689073-100707197 [Contig_View]  HEMGN [Vega]
ICGC DataPortalENSG00000136929
TCGA cBioPortalHEMGN
AceView (NCBI)HEMGN
Genatlas (Paris)HEMGN
WikiGenes55363
SOURCE (Princeton)HEMGN
Genetics Home Reference (NIH)HEMGN
Genomic and cartography
GoldenPath hg19 (UCSC)HEMGN  -     chr9:100689073-100707197 -  9q22.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HEMGN  -     9q22.33   [Description]    (hg38-Dec_2013)
EnsemblHEMGN - 9q22.33 [CytoView hg19]  HEMGN - 9q22.33 [CytoView hg38]
Mapping of homologs : NCBIHEMGN [Mapview hg19]  HEMGN [Mapview hg38]
OMIM610715   
Gene and transcription
Genbank (Entrez)AF116617 AF130060 AF228713 AF306681 AF306682
RefSeq transcript (Entrez)NM_018437 NM_197978
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)HEMGN
Cluster EST : UnigeneHs.176626 [ NCBI ]
CGAP (NCI)Hs.176626
Alternative Splicing GalleryENSG00000136929
Gene ExpressionHEMGN [ NCBI-GEO ]   HEMGN [ EBI - ARRAY_EXPRESS ]   HEMGN [ SEEK ]   HEMGN [ MEM ]
Gene Expression Viewer (FireBrowse)HEMGN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55363
GTEX Portal (Tissue expression)HEMGN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXL5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXL5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXL5
Splice isoforms : SwissVarQ9BXL5
PhosPhoSitePlusQ9BXL5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HEMGN
DMDM Disease mutations55363
Blocks (Seattle)HEMGN
SuperfamilyQ9BXL5
Human Protein AtlasENSG00000136929
Peptide AtlasQ9BXL5
HPRD17100
IPIIPI00464963   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXL5
IntAct (EBI)Q9BXL5
FunCoupENSG00000136929
BioGRIDHEMGN
STRING (EMBL)HEMGN
ZODIACHEMGN
Ontologies - Pathways
QuickGOQ9BXL5
Ontology : AmiGOprotein binding  nucleoplasm  multicellular organism development  cell differentiation  regulation of osteoblast differentiation  
Ontology : EGO-EBIprotein binding  nucleoplasm  multicellular organism development  cell differentiation  regulation of osteoblast differentiation  
NDEx NetworkHEMGN
Atlas of Cancer Signalling NetworkHEMGN
Wikipedia pathwaysHEMGN
Orthology - Evolution
OrthoDB55363
GeneTree (enSembl)ENSG00000136929
Phylogenetic Trees/Animal Genes : TreeFamHEMGN
HOVERGENQ9BXL5
HOGENOMQ9BXL5
Homologs : HomoloGeneHEMGN
Homology/Alignments : Family Browser (UCSC)HEMGN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHEMGN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HEMGN
dbVarHEMGN
ClinVarHEMGN
1000_GenomesHEMGN 
Exome Variant ServerHEMGN
ExAC (Exome Aggregation Consortium)HEMGN (select the gene name)
Genetic variants : HAPMAP55363
Genomic Variants (DGV)HEMGN [DGVbeta]
DECIPHER (Syndromes)9:100689073-100707197  ENSG00000136929
CONAN: Copy Number AnalysisHEMGN 
Mutations
ICGC Data PortalHEMGN 
TCGA Data PortalHEMGN 
Broad Tumor PortalHEMGN
OASIS PortalHEMGN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHEMGN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHEMGN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HEMGN
DgiDB (Drug Gene Interaction Database)HEMGN
DoCM (Curated mutations)HEMGN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HEMGN (select a term)
intoGenHEMGN
Cancer3DHEMGN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610715   
Orphanet
MedgenHEMGN
Genetic Testing Registry HEMGN
NextProtQ9BXL5 [Medical]
TSGene55363
GENETestsHEMGN
Huge Navigator HEMGN [HugePedia]
snp3D : Map Gene to Disease55363
BioCentury BCIQHEMGN
ClinGenHEMGN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55363
Chemical/Pharm GKB GenePA38458
Clinical trialHEMGN
Miscellaneous
canSAR (ICR)HEMGN (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHEMGN
EVEXHEMGN
GoPubMedHEMGN
iHOPHEMGN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:08:51 CET 2017

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