Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HERC2P10 (hect domain and RLD 2 pseudogene 10)

Identity

Other alias-
HGNC (Hugo) HERC2P10
LocusID (NCBI) 390561
Atlas_Id 64240
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30818036 and ends at 30827783 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HERC2P10   39056
Cards
Entrez_Gene (NCBI)HERC2P10  390561  hect domain and RLD 2 pseudogene 10
Aliases
GeneCards (Weizmann)HERC2P10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:30818036-30827783 [Contig_View]  HERC2P10 [Vega]
TCGA cBioPortalHERC2P10
AceView (NCBI)HERC2P10
Genatlas (Paris)HERC2P10
WikiGenes390561
SOURCE (Princeton)HERC2P10
Genetics Home Reference (NIH)HERC2P10
Genomic and cartography
GoldenPath hg38 (UCSC)HERC2P10  -     chr15:30818036-30827783 +  15q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HERC2P10  -     15q13.2   [Description]    (hg19-Feb_2009)
EnsemblHERC2P10 - 15q13.2 [CytoView hg19]  HERC2P10 - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBIHERC2P10 [Mapview hg19]  HERC2P10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DN831747
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_030002 NT_187660 NW_011332701
Consensus coding sequences : CCDS (NCBI)HERC2P10
Cluster EST : UnigeneHs.721293 [ NCBI ]
CGAP (NCI)Hs.721293
Gene ExpressionHERC2P10 [ NCBI-GEO ]   HERC2P10 [ EBI - ARRAY_EXPRESS ]   HERC2P10 [ SEEK ]   HERC2P10 [ MEM ]
Gene Expression Viewer (FireBrowse)HERC2P10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)390561
GTEX Portal (Tissue expression)HERC2P10
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HERC2P10
DMDM Disease mutations390561
Blocks (Seattle)HERC2P10
Protein Interaction databases
BioGRIDHERC2P10
STRING (EMBL)HERC2P10
ZODIACHERC2P10
Ontologies - Pathways
Huge Navigator HERC2P10 [HugePedia]
snp3D : Map Gene to Disease390561
BioCentury BCIQHERC2P10
ClinGenHERC2P10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390561
Clinical trialHERC2P10
Miscellaneous
canSAR (ICR)HERC2P10 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHERC2P10
EVEXHERC2P10
GoPubMedHERC2P10
iHOPHERC2P10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:50:25 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.