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HEXDC-IT1 (HEXDC intronic transcript 1)

Identity

Alias_namesHEXDC intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) HEXDC-IT1
LocusID (NCBI) 100505970
Atlas_Id 64249
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 80383374 and ends at 80385186 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HEXDC-IT1   43650
Cards
Entrez_Gene (NCBI)HEXDC-IT1  100505970  HEXDC intronic transcript 1
Aliases
GeneCards (Weizmann)HEXDC-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr17:80383374-80385186 [Contig_View]  HEXDC-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:80383374-80385186 [Contig_View]  HEXDC-IT1 [Vega]
TCGA cBioPortalHEXDC-IT1
AceView (NCBI)HEXDC-IT1
Genatlas (Paris)HEXDC-IT1
WikiGenes100505970
SOURCE (Princeton)HEXDC-IT1
Genetics Home Reference (NIH)HEXDC-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)HEXDC-IT1  -     chr17:80383374-80385186 +  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HEXDC-IT1  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblHEXDC-IT1 - 17q25.3 [CytoView hg19]  HEXDC-IT1 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIHEXDC-IT1 [Mapview hg19]  HEXDC-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK129961
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010663 NW_001838459 NW_004078093
Consensus coding sequences : CCDS (NCBI)HEXDC-IT1
Cluster EST : UnigeneHs.689403 [ NCBI ]
CGAP (NCI)Hs.689403
Gene ExpressionHEXDC-IT1 [ NCBI-GEO ]   HEXDC-IT1 [ EBI - ARRAY_EXPRESS ]   HEXDC-IT1 [ SEEK ]   HEXDC-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)HEXDC-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505970
GTEX Portal (Tissue expression)HEXDC-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HEXDC-IT1
DMDM Disease mutations100505970
Blocks (Seattle)HEXDC-IT1
IPIIPI00442880   
Protein Interaction databases
BioGRIDHEXDC-IT1
STRING (EMBL)HEXDC-IT1
ZODIACHEXDC-IT1
Ontologies - Pathways
Huge Navigator HEXDC-IT1 [HugePedia]
snp3D : Map Gene to Disease100505970
BioCentury BCIQHEXDC-IT1
ClinGenHEXDC-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505970
Clinical trialHEXDC-IT1
Miscellaneous
canSAR (ICR)HEXDC-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHEXDC-IT1
EVEXHEXDC-IT1
GoPubMedHEXDC-IT1
iHOPHEXDC-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:40 CET 2017

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