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HHATL (hedgehog acyltransferase-like)

Identity

Alias_namesC3orf3
GUP1
chromosome 3 open reading frame 3
GUP1, glycerol uptake/transporter homolog (yeast)
Alias_symbol (synonym)KIAA1173
OACT3
MSTP002
MBOAT3
Other alias
HGNC (Hugo) HHATL
LocusID (NCBI) 57467
Atlas_Id 51674
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 42692663 and ends at 42702827 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HHATL   13242
Cards
Entrez_Gene (NCBI)HHATL  57467  hedgehog acyltransferase-like
AliasesC3orf3; GUP1; MBOAT3; MSTP002; 
OACT3
GeneCards (Weizmann)HHATL
Ensembl hg19 (Hinxton)ENSG00000010282 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000010282 [Gene_View]  chr3:42692663-42702827 [Contig_View]  HHATL [Vega]
ICGC DataPortalENSG00000010282
TCGA cBioPortalHHATL
AceView (NCBI)HHATL
Genatlas (Paris)HHATL
WikiGenes57467
SOURCE (Princeton)HHATL
Genetics Home Reference (NIH)HHATL
Genomic and cartography
GoldenPath hg38 (UCSC)HHATL  -     chr3:42692663-42702827 -  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HHATL  -     3p22.1   [Description]    (hg19-Feb_2009)
EnsemblHHATL - 3p22.1 [CytoView hg19]  HHATL - 3p22.1 [CytoView hg38]
Mapping of homologs : NCBIHHATL [Mapview hg19]  HHATL [Mapview hg38]
OMIM608116   
Gene and transcription
Genbank (Entrez)AB032999 AB042554 AF109356 BC022529 BI544867
RefSeq transcript (Entrez)NM_020707
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HHATL
Cluster EST : UnigeneHs.476041 [ NCBI ]
CGAP (NCI)Hs.476041
Alternative Splicing GalleryENSG00000010282
Gene ExpressionHHATL [ NCBI-GEO ]   HHATL [ EBI - ARRAY_EXPRESS ]   HHATL [ SEEK ]   HHATL [ MEM ]
Gene Expression Viewer (FireBrowse)HHATL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57467
GTEX Portal (Tissue expression)HHATL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCP6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCP6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCP6
Splice isoforms : SwissVarQ9HCP6
PhosPhoSitePlusQ9HCP6
Domains : Interpro (EBI)HHAT-like    MBOAT_fam   
Domain families : Pfam (Sanger)MBOAT (PF03062)   
Domain families : Pfam (NCBI)pfam03062   
Conserved Domain (NCBI)HHATL
DMDM Disease mutations57467
Blocks (Seattle)HHATL
SuperfamilyQ9HCP6
Human Protein AtlasENSG00000010282
Peptide AtlasQ9HCP6
HPRD12166
IPIIPI00289147   IPI00514364   IPI00926394   IPI00924971   IPI00925172   IPI00927115   IPI00927322   IPI00924586   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCP6
IntAct (EBI)Q9HCP6
FunCoupENSG00000010282
BioGRIDHHATL
STRING (EMBL)HHATL
ZODIACHHATL
Ontologies - Pathways
QuickGOQ9HCP6
Ontology : AmiGOendoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  perinuclear region of cytoplasm  negative regulation of N-terminal protein palmitoylation  
Ontology : EGO-EBIendoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  perinuclear region of cytoplasm  negative regulation of N-terminal protein palmitoylation  
NDEx NetworkHHATL
Atlas of Cancer Signalling NetworkHHATL
Wikipedia pathwaysHHATL
Orthology - Evolution
OrthoDB57467
GeneTree (enSembl)ENSG00000010282
Phylogenetic Trees/Animal Genes : TreeFamHHATL
HOVERGENQ9HCP6
HOGENOMQ9HCP6
Homologs : HomoloGeneHHATL
Homology/Alignments : Family Browser (UCSC)HHATL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHHATL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HHATL
dbVarHHATL
ClinVarHHATL
1000_GenomesHHATL 
Exome Variant ServerHHATL
ExAC (Exome Aggregation Consortium)HHATL (select the gene name)
Genetic variants : HAPMAP57467
Genomic Variants (DGV)HHATL [DGVbeta]
DECIPHERHHATL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHHATL 
Mutations
ICGC Data PortalHHATL 
TCGA Data PortalHHATL 
Broad Tumor PortalHHATL
OASIS PortalHHATL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHHATL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHHATL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HHATL
DgiDB (Drug Gene Interaction Database)HHATL
DoCM (Curated mutations)HHATL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HHATL (select a term)
intoGenHHATL
Cancer3DHHATL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608116   
Orphanet
MedgenHHATL
Genetic Testing Registry HHATL
NextProtQ9HCP6 [Medical]
TSGene57467
GENETestsHHATL
Target ValidationHHATL
Huge Navigator HHATL [HugePedia]
snp3D : Map Gene to Disease57467
BioCentury BCIQHHATL
ClinGenHHATL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57467
Chemical/Pharm GKB GenePA162390892
Clinical trialHHATL
Miscellaneous
canSAR (ICR)HHATL (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHHATL
EVEXHHATL
GoPubMedHHATL
iHOPHHATL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:36:44 CEST 2017

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