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HHIPL1 (HHIP-like 1)

Identity

Alias_namesKIAA1822
KIAA1822
HHIP-like 1
Other aliasUNQ9245
HGNC (Hugo) HHIPL1
LocusID (NCBI) 84439
Atlas_Id 64255
Location 14q32.2  [Link to chromosome band 14q32]
Location_base_pair Starts at 100111480 and ends at 100143011 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HHIPL1   19710
Cards
Entrez_Gene (NCBI)HHIPL1  84439  HHIP-like 1
AliasesKIAA1822; UNQ9245
GeneCards (Weizmann)HHIPL1
Ensembl hg19 (Hinxton)ENSG00000182218 [Gene_View]  chr14:100111480-100143011 [Contig_View]  HHIPL1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000182218 [Gene_View]  chr14:100111480-100143011 [Contig_View]  HHIPL1 [Vega]
ICGC DataPortalENSG00000182218
TCGA cBioPortalHHIPL1
AceView (NCBI)HHIPL1
Genatlas (Paris)HHIPL1
WikiGenes84439
SOURCE (Princeton)HHIPL1
Genetics Home Reference (NIH)HHIPL1
Genomic and cartography
GoldenPath hg19 (UCSC)HHIPL1  -     chr14:100111480-100143011 +  14q32.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HHIPL1  -     14q32.2   [Description]    (hg38-Dec_2013)
EnsemblHHIPL1 - 14q32.2 [CytoView hg19]  HHIPL1 - 14q32.2 [CytoView hg38]
Mapping of homologs : NCBIHHIPL1 [Mapview hg19]  HHIPL1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB058725 AB593096 AB593097 AK095603 AY358173
RefSeq transcript (Entrez)NM_001127258 NM_032425
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)HHIPL1
Cluster EST : UnigeneHs.288522 [ NCBI ]
CGAP (NCI)Hs.288522
Alternative Splicing GalleryENSG00000182218
Gene ExpressionHHIPL1 [ NCBI-GEO ]   HHIPL1 [ EBI - ARRAY_EXPRESS ]   HHIPL1 [ SEEK ]   HHIPL1 [ MEM ]
Gene Expression Viewer (FireBrowse)HHIPL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84439
GTEX Portal (Tissue expression)HHIPL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JK4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JK4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JK4
Splice isoforms : SwissVarQ96JK4
PhosPhoSitePlusQ96JK4
Domaine pattern : Prosite (Expaxy)SRCR_1 (PS00420)    SRCR_2 (PS50287)   
Domains : Interpro (EBI)6-blade_b-propeller_TolB-like    Folate_rcpt-like    Glc/Sorbosone_DH    Quinoprot_gluc/sorb_DH    SRCR    SRCR-like_dom   
Domain families : Pfam (Sanger)Folate_rec (PF03024)    GSDH (PF07995)    SRCR (PF00530)   
Domain families : Pfam (NCBI)pfam03024    pfam07995    pfam00530   
Domain families : Smart (EMBL)SR (SM00202)  
Conserved Domain (NCBI)HHIPL1
DMDM Disease mutations84439
Blocks (Seattle)HHIPL1
SuperfamilyQ96JK4
Human Protein AtlasENSG00000182218
Peptide AtlasQ96JK4
HPRD13895
IPIIPI00477056   IPI00873374   IPI00983040   
Protein Interaction databases
DIP (DOE-UCLA)Q96JK4
IntAct (EBI)Q96JK4
FunCoupENSG00000182218
BioGRIDHHIPL1
STRING (EMBL)HHIPL1
ZODIACHHIPL1
Ontologies - Pathways
QuickGOQ96JK4
Ontology : AmiGOmolecular_function  scavenger receptor activity  cellular_component  extracellular region  carbohydrate metabolic process  receptor-mediated endocytosis  biological_process  membrane  oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor  quinone binding  oxidation-reduction process  
Ontology : EGO-EBImolecular_function  scavenger receptor activity  cellular_component  extracellular region  carbohydrate metabolic process  receptor-mediated endocytosis  biological_process  membrane  oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor  quinone binding  oxidation-reduction process  
NDEx NetworkHHIPL1
Atlas of Cancer Signalling NetworkHHIPL1
Wikipedia pathwaysHHIPL1
Orthology - Evolution
OrthoDB84439
GeneTree (enSembl)ENSG00000182218
Phylogenetic Trees/Animal Genes : TreeFamHHIPL1
HOVERGENQ96JK4
HOGENOMQ96JK4
Homologs : HomoloGeneHHIPL1
Homology/Alignments : Family Browser (UCSC)HHIPL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHHIPL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HHIPL1
dbVarHHIPL1
ClinVarHHIPL1
1000_GenomesHHIPL1 
Exome Variant ServerHHIPL1
ExAC (Exome Aggregation Consortium)HHIPL1 (select the gene name)
Genetic variants : HAPMAP84439
Genomic Variants (DGV)HHIPL1 [DGVbeta]
DECIPHER (Syndromes)14:100111480-100143011  ENSG00000182218
CONAN: Copy Number AnalysisHHIPL1 
Mutations
ICGC Data PortalHHIPL1 
TCGA Data PortalHHIPL1 
Broad Tumor PortalHHIPL1
OASIS PortalHHIPL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHHIPL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHHIPL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HHIPL1
DgiDB (Drug Gene Interaction Database)HHIPL1
DoCM (Curated mutations)HHIPL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HHIPL1 (select a term)
intoGenHHIPL1
Cancer3DHHIPL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenHHIPL1
Genetic Testing Registry HHIPL1
NextProtQ96JK4 [Medical]
TSGene84439
GENETestsHHIPL1
Huge Navigator HHIPL1 [HugePedia]
snp3D : Map Gene to Disease84439
BioCentury BCIQHHIPL1
ClinGenHHIPL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84439
Chemical/Pharm GKB GenePA162390893
Clinical trialHHIPL1
Miscellaneous
canSAR (ICR)HHIPL1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHHIPL1
EVEXHHIPL1
GoPubMedHHIPL1
iHOPHHIPL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:07:41 CET 2017

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