Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HIPK1-AS1 (HIPK1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) HIPK1-AS1
LocusID (NCBI) 101928846
Atlas_Id 64273
Location 1p13.2  [Link to chromosome band 1p13]
Location_base_pair Starts at 113924001 and ends at 113929258 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HIPK1-AS1   50576
Cards
Entrez_Gene (NCBI)HIPK1-AS1  101928846  HIPK1 antisense RNA 1
Aliases
GeneCards (Weizmann)HIPK1-AS1
Ensembl hg19 (Hinxton)ENSG00000235527 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235527 [Gene_View]  chr1:113924001-113929258 [Contig_View]  HIPK1-AS1 [Vega]
ICGC DataPortalENSG00000235527
TCGA cBioPortalHIPK1-AS1
AceView (NCBI)HIPK1-AS1
Genatlas (Paris)HIPK1-AS1
WikiGenes101928846
SOURCE (Princeton)HIPK1-AS1
Genetics Home Reference (NIH)HIPK1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)HIPK1-AS1  -     chr1:113924001-113929258 -  1p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HIPK1-AS1  -     1p13.2   [Description]    (hg19-Feb_2009)
EnsemblHIPK1-AS1 - 1p13.2 [CytoView hg19]  HIPK1-AS1 - 1p13.2 [CytoView hg38]
Mapping of homologs : NCBIHIPK1-AS1 [Mapview hg19]  HIPK1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036361 BC048113 HY108301
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HIPK1-AS1
Cluster EST : UnigeneHs.232534 [ NCBI ]
CGAP (NCI)Hs.232534
Alternative Splicing GalleryENSG00000235527
Gene ExpressionHIPK1-AS1 [ NCBI-GEO ]   HIPK1-AS1 [ EBI - ARRAY_EXPRESS ]   HIPK1-AS1 [ SEEK ]   HIPK1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HIPK1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928846
GTEX Portal (Tissue expression)HIPK1-AS1
Human Protein AtlasENSG00000235527-HIPK1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HIPK1-AS1
DMDM Disease mutations101928846
Blocks (Seattle)HIPK1-AS1
Human Protein Atlas [tissue]ENSG00000235527-HIPK1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000235527
BioGRIDHIPK1-AS1
STRING (EMBL)HIPK1-AS1
ZODIACHIPK1-AS1
Ontologies - Pathways
Huge Navigator HIPK1-AS1 [HugePedia]
snp3D : Map Gene to Disease101928846
BioCentury BCIQHIPK1-AS1
ClinGenHIPK1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928846
Clinical trialHIPK1-AS1
Miscellaneous
canSAR (ICR)HIPK1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHIPK1-AS1
EVEXHIPK1-AS1
GoPubMedHIPK1-AS1
iHOPHIPK1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:00:24 CET 2017

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