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HIPK4 (homeodomain interacting protein kinase 4)

Identity

Other names-
HGNC (Hugo) HIPK4
LocusID (NCBI) 147746
Location 19q13.2
Location_base_pair Starts at 40885178 and ends at 40896094 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HIPK4   19007
Entrez_Gene (NCBI)HIPK4  147746  homeodomain interacting protein kinase 4
Cards
GeneCards (Weizmann)HIPK4
Ensembl (Hinxton)ENSG00000160396 [Gene_View]  chr19:40885178-40896094 [Contig_View]  HIPK4 [Vega]
AceView (NCBI)HIPK4
Genatlas (Paris)HIPK4
SOURCE (Stanford)NM_144685
Genomic and cartography
GoldenPath (UCSC)HIPK4  -  19q13.2   chr19:40885178-40896094 -  19q13.2   [Description]    (hg19-Feb_2009)
EnsemblHIPK4 - 19q13.2 [CytoView]
Mapping of homologs : NCBIHIPK4 [Mapview]
OMIM611712   
Gene and transcription
Genbank (Entrez)AK057380 AK292228 AK301713 AK302301 BC034501
RefSeq transcript (SRS)NM_144685
RefSeq transcript (Entrez)NM_144685
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838496 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838496 NW_004078099
Consensus coding sequences : CCDS (NCBI)HIPK4
Cluster EST : UnigeneHs.79363 [ SRS ] Hs.79363 [ NCBI ]
CGAP (NCI)Hs.79363
Alternative Splicing : Fast-db (Paris)GSHG0015829
Alternative Splicing GalleryENSG00000160396
Gene ExpressionHIPK4 [ NCBI-GEO ]   HIPK4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NE63 (SRS) Q8NE63 (Uniprot)
NextProtQ8NE63
With graphics : InterProQ8NE63
Splice isoforms : SwissVarQ8NE63(Swissvar)
Domaine pattern : Prosite (SRS)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Ser/Thr_kinase_AS   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Ser/Thr_kinase_AS   
Related proteins : CluSTrQ8NE63
Domain families : Pfam (SRS)Pkinase (PF00069)   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
DMDM147746
Blocks (Seattle)Q8NE63
Human Protein AtlasENSG00000160396
HPRD13652
IPIIPI00302130   IPI00387062   IPI01015188   
Protein Interaction databases
DIP (DOE-UCLA)Q8NE63
IntAct (EBI)Q8NE63
FunCoupENSG00000160396
REACTOMEHIPK4
Protein Interaction Database147746
BioGRIDHIPK4
InParanoidQ8NE63
Interologous Interaction database Q8NE63
IntegromeDBHIPK4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)HIPK4
SNP (GeneSNP Utah)HIPK4
SNP : HGBaseHIPK4
Genetic variants : HAPMAPHIPK4
Somatic Mutations in Cancer : COSMICHIPK4 
CONAN: Copy Number AnalysisHIPK4 
Mutations and Diseases : HGMDHIPK4
OMIM611712   
GENETests611712   
Disease Genetic AssociationHIPK4
Huge Navigator HIPK4 [HugePedia]  HIPK4 [HugeCancerGEM]
Genomic VariantsHIPK4  HIPK4 [DGVbeta]
snp3D : Map Gene to Disease147746
General knowledge
Homologs : HomoloGeneHIPK4
Homology/Alignments : Family Browser (UCSC)HIPK4
Phylogenetic Trees/Animal Genes : TreeFamHIPK4
Chemical/Protein Interactions : CTD147746
Chemical/Pharm GKB GenePA134883524
Clinical trialHIPK4
Cancer Resource (Charite)ENSG00000160396
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  cytoplasm  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  cytoplasm  
Other databases
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
PubGeneHIPK4
iHOPHIPK4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:42:48 CEST 2013
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