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HIST1H2AC (-)

Identity

Alias_namesH2AFL
H2A histone family, member L
histone 1, H2ac
histone cluster 1, H2ac
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 8334
Atlas_Id 40825
Location -  [Link to chromosome band ]
Location_base_pair Starts at 26124145 and ends at 26124690 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BTN2A1 (6p22.2) / HIST1H2AC (6p22.2)BTN3A2 (6p22.2) / HIST1H2AC (6p22.2)GLTSCR1L (6p21.1) / HIST1H2AC (6p22.2)
HIST1H2AC (6p22.2) / LHFPL2 (5q14.1)HIST1H2AC (6p22.2) / SLC17A4 (6p22.2)KLHL8 (4q22.1) / HIST1H2AC (6p22.2)
LHFPL2 (5q14.1) / HIST1H2AC (6p22.2)MRPS28 (8q21.13) / HIST1H2AC (6p22.2)BTN2A1 6p22.2 / HIST1H2AC 6p22.2
BTN3A2 6p22.2 / HIST1H2AC 6p22.2HIST1H2AC 6p22.2 / LHFPL2 5q14.1HIST1H2AC 6p22.2 / SLC17A4 6p22.2
KIAA0240 HIST1H2AC 6p22.2LHFPL2 5q14.1 / HIST1H2AC 6p22.2MRPS28 8q21.13 / HIST1H2AC 6p22.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 6 ]

Solid Tumors TT_t0506q14p22ID106783 TT_t0506q14p22ID106784 TT_t0606p22p22ID107141 TT_t0606p22p22ID107143 TT_t0606p22p22ID107147
TT_t0608p22q21ID107333


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HIST1H2AC  8334  -
Aliases
GeneCards (Weizmann)HIST1H2AC
Ensembl hg19 (Hinxton)ENSG00000180573 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180573 [Gene_View]  ENSG00000180573 [Sequence]  chr6:26124145-26124690 [Contig_View]  HIST1H2AC [Vega]
ICGC DataPortalENSG00000180573
TCGA cBioPortalHIST1H2AC
AceView (NCBI)HIST1H2AC
Genatlas (Paris)HIST1H2AC
WikiGenes8334
SOURCE (Princeton)HIST1H2AC
Genetics Home Reference (NIH)HIST1H2AC
Genomic and cartography
GoldenPath hg38 (UCSC)HIST1H2AC  -     chr6:26124145-26124690 +  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HIST1H2AC  -     -   [Description]    (hg19-Feb_2009)
GoldenPathHIST1H2AC - - [CytoView hg19]  HIST1H2AC - - [CytoView hg38]
ImmunoBaseENSG00000180573
Mapping of homologs : NCBIHIST1H2AC [Mapview hg19]  HIST1H2AC [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HIST1H2AC
Alternative Splicing GalleryENSG00000180573
Gene ExpressionHIST1H2AC [ NCBI-GEO ]   HIST1H2AC [ EBI - ARRAY_EXPRESS ]   HIST1H2AC [ SEEK ]   HIST1H2AC [ MEM ]
Gene Expression Viewer (FireBrowse)HIST1H2AC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)8334
GTEX Portal (Tissue expression)HIST1H2AC
Human Protein AtlasENSG00000180573-HIST1H2AC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HIST1H2AC
DMDM Disease mutations8334
Blocks (Seattle)HIST1H2AC
Human Protein Atlas [tissue]ENSG00000180573-HIST1H2AC [tissue]
HPRD09104
IPIIPI00216456   
Protein Interaction databases
FunCoupENSG00000180573
BioGRIDHIST1H2AC
STRING (EMBL)HIST1H2AC
ZODIACHIST1H2AC
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease8334
BioCentury BCIQHIST1H2AC
ClinGenHIST1H2AC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8334
Clinical trialHIST1H2AC
Miscellaneous
canSAR (ICR)HIST1H2AC (select the gene name)
DataMed IndexHIST1H2AC
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHIST1H2AC
EVEXHIST1H2AC
GoPubMedHIST1H2AC
iHOPHIST1H2AC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 12 15:37:03 CEST 2019

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