Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

HIST1H2AE (-)

Identity

Alias_namesH2AFA
H2A histone family, member A
histone 1, H2ae
histone cluster 1, H2ae
Alias_symbol (synonym)H2A/a
H2A.1
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 3012
Atlas_Id 56527
Location -  [Link to chromosome band ]
Location_base_pair Starts at 26216920 and ends at 26217483 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)HIST1H2AE  3012  -
Aliases
GeneCards (Weizmann)HIST1H2AE
Ensembl hg19 (Hinxton)ENSG00000277075 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277075 [Gene_View]  ENSG00000277075 [Sequence]  chr6:26216920-26217483 [Contig_View]  HIST1H2AE [Vega]
ICGC DataPortalENSG00000277075
TCGA cBioPortalHIST1H2AE
AceView (NCBI)HIST1H2AE
Genatlas (Paris)HIST1H2AE
WikiGenes3012
SOURCE (Princeton)HIST1H2AE
Genetics Home Reference (NIH)HIST1H2AE
Genomic and cartography
GoldenPath hg38 (UCSC)HIST1H2AE  -     chr6:26216920-26217483 +  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HIST1H2AE  -     -   [Description]    (hg19-Feb_2009)
GoldenPathHIST1H2AE - - [CytoView hg19]  HIST1H2AE - - [CytoView hg38]
ImmunoBaseENSG00000277075
Mapping of homologs : NCBIHIST1H2AE [Mapview hg19]  HIST1H2AE [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HIST1H2AE
Alternative Splicing GalleryENSG00000277075
Gene ExpressionHIST1H2AE [ NCBI-GEO ]   HIST1H2AE [ EBI - ARRAY_EXPRESS ]   HIST1H2AE [ SEEK ]   HIST1H2AE [ MEM ]
Gene Expression Viewer (FireBrowse)HIST1H2AE [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3012
GTEX Portal (Tissue expression)HIST1H2AE
Human Protein AtlasENSG00000277075-HIST1H2AE [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HIST1H2AE
DMDM Disease mutations3012
Blocks (Seattle)HIST1H2AE
Human Protein Atlas [tissue]ENSG00000277075-HIST1H2AE [tissue]
HPRD04152
Protein Interaction databases
FunCoupENSG00000277075
BioGRIDHIST1H2AE
STRING (EMBL)HIST1H2AE
ZODIACHIST1H2AE
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease3012
BioCentury BCIQHIST1H2AE
ClinGenHIST1H2AE
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3012
Clinical trialHIST1H2AE
Miscellaneous
canSAR (ICR)HIST1H2AE (select the gene name)
DataMed IndexHIST1H2AE
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineHIST1H2AE
EVEXHIST1H2AE
GoPubMedHIST1H2AE
iHOPHIST1H2AE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 12 15:37:03 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.