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HIST1H3G (histone cluster 1 H3 family member g)

Identity

Alias_namesH3FH
H3 histone family, member H
histone 1, H3g
histone cluster 1, H3g
Alias_symbol (synonym)H3/h
Other alias
HGNC (Hugo) HIST1H3G
LocusID (NCBI) 8355
Atlas_Id 64307
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26270918 and ends at 26271384 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HIST1H3G   4772
Cards
Entrez_Gene (NCBI)HIST1H3G  8355  histone cluster 1 H3 family member g
AliasesH3/h; H3FH
GeneCards (Weizmann)HIST1H3G
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:26270918-26271384 [Contig_View]  HIST1H3G [Vega]
TCGA cBioPortalHIST1H3G
AceView (NCBI)HIST1H3G
Genatlas (Paris)HIST1H3G
WikiGenes8355
SOURCE (Princeton)HIST1H3G
Genetics Home Reference (NIH)HIST1H3G
Genomic and cartography
GoldenPath hg38 (UCSC)HIST1H3G  -     chr6:26270918-26271384 -  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HIST1H3G  -     6p22.2   [Description]    (hg19-Feb_2009)
EnsemblHIST1H3G - 6p22.2 [CytoView hg19]  HIST1H3G - 6p22.2 [CytoView hg38]
Mapping of homologs : NCBIHIST1H3G [Mapview hg19]  HIST1H3G [Mapview hg38]
OMIM602815   
Gene and transcription
Genbank (Entrez)BC012185 BC079835 EU446974
RefSeq transcript (Entrez)NM_003534
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HIST1H3G
Cluster EST : UnigeneHs.247813 [ NCBI ]
CGAP (NCI)Hs.247813
Gene ExpressionHIST1H3G [ NCBI-GEO ]   HIST1H3G [ EBI - ARRAY_EXPRESS ]   HIST1H3G [ SEEK ]   HIST1H3G [ MEM ]
Gene Expression Viewer (FireBrowse)HIST1H3G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8355
GTEX Portal (Tissue expression)HIST1H3G
Protein : pattern, domain, 3D structure
UniProt/SwissProtP68431   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP68431  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP68431
Splice isoforms : SwissVarP68431
PhosPhoSitePlusP68431
Domaine pattern : Prosite (Expaxy)HISTONE_H3_1 (PS00322)    HISTONE_H3_2 (PS00959)   
Domains : Interpro (EBI)Histone-fold    Histone_H2A/H2B/H3    Histone_H3/CENP-A   
Domain families : Pfam (Sanger)Histone (PF00125)   
Domain families : Pfam (NCBI)pfam00125   
Domain families : Smart (EMBL)H3 (SM00428)  
Conserved Domain (NCBI)HIST1H3G
DMDM Disease mutations8355
Blocks (Seattle)HIST1H3G
PDB (SRS)###############################################################################################################################################################################################################################################################   
PDB (PDBSum)###############################################################################################################################################################################################################################################################   
PDB (IMB)###############################################################################################################################################################################################################################################################   
PDB (RSDB)###############################################################################################################################################################################################################################################################   
Structural Biology KnowledgeBase###############################################################################################################################################################################################################################################################   
SCOP (Structural Classification of Proteins)###############################################################################################################################################################################################################################################################   
CATH (Classification of proteins structures)###############################################################################################################################################################################################################################################################   
SuperfamilyP68431
Peptide AtlasP68431
HPRD11909
Protein Interaction databases
DIP (DOE-UCLA)P68431
IntAct (EBI)P68431
BioGRIDHIST1H3G
STRING (EMBL)HIST1H3G
ZODIACHIST1H3G
Ontologies - Pathways
QuickGOP68431
Ontology : AmiGO###############################################################################################################################################################################################################################################################  
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################  
NDEx NetworkHIST1H3G
Atlas of Cancer Signalling NetworkHIST1H3G
Wikipedia pathwaysHIST1H3G
Orthology - Evolution
OrthoDB8355
Phylogenetic Trees/Animal Genes : TreeFamHIST1H3G
HOVERGENP68431
HOGENOMP68431
Homologs : HomoloGeneHIST1H3G
Homology/Alignments : Family Browser (UCSC)HIST1H3G
Gene fusions - Rearrangements
Fusion : QuiverHIST1H3G
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHIST1H3G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HIST1H3G
dbVarHIST1H3G
ClinVarHIST1H3G
1000_GenomesHIST1H3G 
Exome Variant ServerHIST1H3G
Varsome BrowserHIST1H3G
Genetic variants : HAPMAP8355
Genomic Variants (DGV)HIST1H3G [DGVbeta]
DECIPHERHIST1H3G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHIST1H3G 
Mutations
ICGC Data PortalHIST1H3G 
TCGA Data PortalHIST1H3G 
Broad Tumor PortalHIST1H3G
OASIS PortalHIST1H3G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHIST1H3G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHIST1H3G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HIST1H3G
DgiDB (Drug Gene Interaction Database)HIST1H3G
DoCM (Curated mutations)HIST1H3G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HIST1H3G (select a term)
intoGenHIST1H3G
Cancer3DHIST1H3G(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602815   
Orphanet
DisGeNETHIST1H3G
MedgenHIST1H3G
Genetic Testing Registry HIST1H3G
NextProtP68431 [Medical]
TSGene8355
GENETestsHIST1H3G
Target ValidationHIST1H3G
Huge Navigator HIST1H3G [HugePedia]
snp3D : Map Gene to Disease8355
BioCentury BCIQHIST1H3G
ClinGenHIST1H3G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8355
Chemical/Pharm GKB GenePA29147
Clinical trialHIST1H3G
Miscellaneous
canSAR (ICR)HIST1H3G (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHIST1H3G
EVEXHIST1H3G
GoPubMedHIST1H3G
iHOPHIST1H3G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:48:58 CEST 2018

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