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HIST1H4F (histone cluster 1 H4 family member f)

Identity

Alias_namesH4FC
H4 histone family, member C
histone 1, H4f
histone cluster 1, H4f
Alias_symbol (synonym)H4/c
H4
Other alias
HGNC (Hugo) HIST1H4F
LocusID (NCBI) 8361
Atlas_Id 53007
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26240426 and ends at 26240793 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HIST1H4F (6p22.2) / BCL6 (3q27.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HIST1H4F   4783
Cards
Entrez_Gene (NCBI)HIST1H4F  8361  histone cluster 1 H4 family member f
AliasesH4; H4/c; H4FC
GeneCards (Weizmann)HIST1H4F
Ensembl hg19 (Hinxton)ENSG00000274618 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274618 [Gene_View]  ENSG00000274618 [Sequence]  chr6:26240426-26240793 [Contig_View]  HIST1H4F [Vega]
ICGC DataPortalENSG00000274618
TCGA cBioPortalHIST1H4F
AceView (NCBI)HIST1H4F
Genatlas (Paris)HIST1H4F
WikiGenes8361
SOURCE (Princeton)HIST1H4F
Genetics Home Reference (NIH)HIST1H4F
Genomic and cartography
GoldenPath hg38 (UCSC)HIST1H4F  -     chr6:26240426-26240793 +  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HIST1H4F  -     6p22.2   [Description]    (hg19-Feb_2009)
EnsemblHIST1H4F - 6p22.2 [CytoView hg19]  HIST1H4F - 6p22.2 [CytoView hg38]
Mapping of homologs : NCBIHIST1H4F [Mapview hg19]  HIST1H4F [Mapview hg38]
OMIM602824   
Gene and transcription
Genbank (Entrez)BC069288 BC093763 BC093765
RefSeq transcript (Entrez)NM_003540
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HIST1H4F
Cluster EST : UnigeneHs.247816 [ NCBI ]
CGAP (NCI)Hs.247816
Alternative Splicing GalleryENSG00000274618
Gene ExpressionHIST1H4F [ NCBI-GEO ]   HIST1H4F [ EBI - ARRAY_EXPRESS ]   HIST1H4F [ SEEK ]   HIST1H4F [ MEM ]
Gene Expression Viewer (FireBrowse)HIST1H4F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8361
GTEX Portal (Tissue expression)HIST1H4F
Human Protein AtlasENSG00000274618-HIST1H4F [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP62805   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP62805  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP62805
Splice isoforms : SwissVarP62805
PhosPhoSitePlusP62805
Domaine pattern : Prosite (Expaxy)HISTONE_H4 (PS00047)   
Domains : Interpro (EBI)CENP-T/H4_C    Histone-fold    Histone_H4    Histone_H4_CS    TAF_TATA-bd   
Domain families : Pfam (Sanger)CENP-T_C (PF15511)   
Domain families : Pfam (NCBI)pfam15511   
Domain families : Smart (EMBL)H4 (SM00417)  TAF (SM00803)  
Conserved Domain (NCBI)HIST1H4F
DMDM Disease mutations8361
Blocks (Seattle)HIST1H4F
PDB (SRS)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
PDB (PDBSum)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
PDB (IMB)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
PDB (RSDB)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
Structural Biology KnowledgeBase1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
SCOP (Structural Classification of Proteins)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
CATH (Classification of proteins structures)1ZKK    2BQZ    2CV5    2IG0    2KWN    2KWO    2LVM    2QQS    2RJE    2RNY    2RS9    3A6N    3AFA    3AN2    3AV1    3AV2    3AYW    3AZE    3AZF    3AZG    3AZH    3AZI    3AZJ    3AZK    3AZL    3AZM    3AZN    3CFS    3CFV    3F9W    3F9X    3F9Y    3F9Z    3IJ1    3JPX    3NQJ    3NQU    3O36    3QBY    3QZS    3QZT    3QZV    3R45    3UVW    3UVX    3UVY    3UW9    3W96    3W97    3W98    3W99    3WA9    3WAA    3WKJ    3WTP    3X1S    3X1T    3X1U    3X1V    4GQB    4H9N    4H9O    4H9P    4H9Q    4H9R    4H9S    4HGA    4M38    4N3W    4N4F    4QUT    4QUU    4QYD    4U9W    4YM5    4YM6    4YY6    4YYD    4YYG    4YYH    4YYI    4YYJ    4YYK    4YYM    4YYN    4Z2M    4Z5T    5AV5    5AV6    5AV8    5AV9    5AVB    5AVC    5AY8    5B0Y    5B0Z    5B24    5B2I    5B2J    5B31    5B32    5B33    5B40    5BNV    5BNX    5BO0    5C3I    5CPI    5CPJ    5CPK    5FA5    5FFW    5FWE    5GSE    5GSU    5GT0    5GT3    5GTC    5GXQ    5JA4    5JRG    5KDM    5TEG    5X7X    5XF3    5XF4    5XF5    6BUZ    6C0W   
SuperfamilyP62805
Human Protein Atlas [tissue]ENSG00000274618-HIST1H4F [tissue]
Peptide AtlasP62805
HPRD11915
Protein Interaction databases
DIP (DOE-UCLA)P62805
IntAct (EBI)P62805
FunCoupENSG00000274618
BioGRIDHIST1H4F
STRING (EMBL)HIST1H4F
ZODIACHIST1H4F
Ontologies - Pathways
QuickGOP62805
Ontology : AmiGOchromatin silencing at rDNA  nuclear chromosome  nuclear chromosome, telomeric region  nucleosome  nucleosome  nuclear nucleosome  DNA binding  RNA binding  protein binding  extracellular region  nucleus  nucleus  nucleoplasm  double-strand break repair via nonhomologous end joining  nucleosome assembly  DNA replication-dependent nucleosome assembly  DNA replication-independent nucleosome assembly  DNA-templated transcription, initiation  membrane  telomere capping  protein domain specific binding  telomere organization  protein-containing complex  CENP-A containing nucleosome assembly  cellular protein metabolic process  regulation of megakaryocyte differentiation  negative regulation of megakaryocyte differentiation  negative regulation of gene expression, epigenetic  protein heterodimerization activity  protein heterotetramerization  regulation of gene silencing by miRNA  extracellular exosome  
Ontology : EGO-EBIchromatin silencing at rDNA  nuclear chromosome  nuclear chromosome, telomeric region  nucleosome  nucleosome  nuclear nucleosome  DNA binding  RNA binding  protein binding  extracellular region  nucleus  nucleus  nucleoplasm  double-strand break repair via nonhomologous end joining  nucleosome assembly  DNA replication-dependent nucleosome assembly  DNA replication-independent nucleosome assembly  DNA-templated transcription, initiation  membrane  telomere capping  protein domain specific binding  telomere organization  protein-containing complex  CENP-A containing nucleosome assembly  cellular protein metabolic process  regulation of megakaryocyte differentiation  negative regulation of megakaryocyte differentiation  negative regulation of gene expression, epigenetic  protein heterodimerization activity  protein heterotetramerization  regulation of gene silencing by miRNA  extracellular exosome  
Pathways : KEGGAlcoholism    Viral carcinogenesis    Systemic lupus erythematosus   
NDEx NetworkHIST1H4F
Atlas of Cancer Signalling NetworkHIST1H4F
Wikipedia pathwaysHIST1H4F
Orthology - Evolution
OrthoDB8361
GeneTree (enSembl)ENSG00000274618
Phylogenetic Trees/Animal Genes : TreeFamHIST1H4F
HOVERGENP62805
HOGENOMP62805
Homologs : HomoloGeneHIST1H4F
Homology/Alignments : Family Browser (UCSC)HIST1H4F
Gene fusions - Rearrangements
Fusion : QuiverHIST1H4F
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerHIST1H4F [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)HIST1H4F
dbVarHIST1H4F
ClinVarHIST1H4F
1000_GenomesHIST1H4F 
Exome Variant ServerHIST1H4F
ExAC (Exome Aggregation Consortium)ENSG00000274618
GNOMAD BrowserENSG00000274618
Varsome BrowserHIST1H4F
Genetic variants : HAPMAP8361
Genomic Variants (DGV)HIST1H4F [DGVbeta]
DECIPHERHIST1H4F [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisHIST1H4F 
Mutations
ICGC Data PortalHIST1H4F 
TCGA Data PortalHIST1H4F 
Broad Tumor PortalHIST1H4F
OASIS PortalHIST1H4F [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICHIST1H4F  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDHIST1H4F
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch HIST1H4F
DgiDB (Drug Gene Interaction Database)HIST1H4F
DoCM (Curated mutations)HIST1H4F (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)HIST1H4F (select a term)
intoGenHIST1H4F
Cancer3DHIST1H4F(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602824   
Orphanet
DisGeNETHIST1H4F
MedgenHIST1H4F
Genetic Testing Registry HIST1H4F
NextProtP62805 [Medical]
TSGene8361
GENETestsHIST1H4F
Target ValidationHIST1H4F
Huge Navigator HIST1H4F [HugePedia]
snp3D : Map Gene to Disease8361
BioCentury BCIQHIST1H4F
ClinGenHIST1H4F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8361
Chemical/Pharm GKB GenePA29158
Clinical trialHIST1H4F
Miscellaneous
canSAR (ICR)HIST1H4F (select the gene name)
Probes
Litterature
PubMed101 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHIST1H4F
EVEXHIST1H4F
GoPubMedHIST1H4F
iHOPHIST1H4F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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