Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HK1 (hexokinase 1)

Identity

Other namesHK1-ta
HK1-tb
HK1-tc
HKD
HKI
HMSNR
HXK1
HGNC (Hugo) HK1
LocusID (NCBI) 3098
Location 10q22.1
Location_base_pair Starts at 71078603 and ends at 71161637 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)HK1   4922
Cards
Entrez_Gene (NCBI)HK1  3098  hexokinase 1
GeneCards (Weizmann)HK1
Ensembl (Hinxton)ENSG00000156515 [Gene_View]  chr10:71078603-71161637 [Contig_View]  HK1 [Vega]
ICGC DataPortalENSG00000156515
cBioPortalHK1
AceView (NCBI)HK1
Genatlas (Paris)HK1
WikiGenes3098
SOURCE (Princeton)NM_000188 NM_033496 NM_033497 NM_033498 NM_033500
Genomic and cartography
GoldenPath (UCSC)HK1  -  10q22.1   chr10:71078603-71161637 +  10q22.1   [Description]    (hg19-Feb_2009)
EnsemblHK1 - 10q22.1 [CytoView]
Mapping of homologs : NCBIHK1 [Mapview]
OMIM142600   235700   
Gene and transcription
Genbank (Entrez)AB209526 AF073786 AK091267 AK128226 AK292012
RefSeq transcript (Entrez)NM_000188 NM_033496 NM_033497 NM_033498 NM_033500
RefSeq genomic (Entrez)AC_000142 NC_000010 NC_018921 NG_012077 NT_030059 NW_001837986 NW_004929376
Consensus coding sequences : CCDS (NCBI)HK1
Cluster EST : UnigeneHs.370365 [ NCBI ]
CGAP (NCI)Hs.370365
Alternative Splicing : Fast-db (Paris)GSHG0003420
Alternative Splicing GalleryENSG00000156515
Gene ExpressionHK1 [ NCBI-GEO ]     HK1 [ SEEK ]   HK1 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP19367 (Uniprot)
NextProtP19367  [Medical]
With graphics : InterProP19367
Splice isoforms : SwissVarP19367 (Swissvar)
Catalytic activity : Enzyme2.7.1.1 [ Enzyme-Expasy ]   2.7.1.12.7.1.1 [ IntEnz-EBI ]   2.7.1.1 [ BRENDA ]   2.7.1.1 [ KEGG ]   
Domaine pattern : Prosite (Expaxy)HEXOKINASES (PS00378)   
Domains : Interpro (EBI)Hexokinase [organisation]   Hexokinase_C [organisation]   Hexokinase_CS [organisation]   Hexokinase_N [organisation]  
Related proteins : CluSTrP19367
Domain families : Pfam (Sanger)Hexokinase_1 (PF00349)    Hexokinase_2 (PF03727)   
Domain families : Pfam (NCBI)pfam00349    pfam03727   
DMDM Disease mutations3098
Blocks (Seattle)P19367
PDB (SRS)1CZA    1DGK    1HKB    1HKC    1QHA    4F9O    4FOE    4FOI    4FPA    4FPB   
PDB (PDBSum)1CZA    1DGK    1HKB    1HKC    1QHA    4F9O    4FOE    4FOI    4FPA    4FPB   
PDB (IMB)1CZA    1DGK    1HKB    1HKC    1QHA    4F9O    4FOE    4FOI    4FPA    4FPB   
PDB (RSDB)1CZA    1DGK    1HKB    1HKC    1QHA    4F9O    4FOE    4FOI    4FPA    4FPB   
Human Protein AtlasENSG00000156515 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasP19367
HPRD00809
IPIIPI00018246   IPI00220663   IPI00220665   IPI00220667   IPI00903226   IPI01014693   IPI00815786   IPI01008922   
Protein Interaction databases
DIP (DOE-UCLA)P19367
IntAct (EBI)P19367
FunCoupENSG00000156515
BioGRIDHK1
InParanoidP19367
Interologous Interaction database P19367
IntegromeDBHK1
STRING (EMBL)HK1
Ontologies - Pathways
Ontology : AmiGOcellular glucose homeostasis  glucokinase activity  hexokinase activity  protein binding  ATP binding  nucleus  nucleolus  mitochondrion  mitochondrial outer membrane  cytosol  carbohydrate metabolic process  glycolysis  cell death  hexose transport  fructokinase activity  glucose transport  mannokinase activity  small molecule metabolic process  membrane raft  glucose 6-phosphate metabolic process  transmembrane transport  
Ontology : EGO-EBIcellular glucose homeostasis  glucokinase activity  hexokinase activity  protein binding  ATP binding  nucleus  nucleolus  mitochondrion  mitochondrial outer membrane  cytosol  carbohydrate metabolic process  glycolysis  cell death  hexose transport  fructokinase activity  glucose transport  mannokinase activity  small molecule metabolic process  membrane raft  glucose 6-phosphate metabolic process  transmembrane transport  
Pathways : BIOCARTAGlycolysis Pathway [Genes]   
Pathways : KEGGGlycolysis / Gluconeogenesis    Fructose and mannose metabolism    Galactose metabolism    Starch and sucrose metabolism    Amino sugar and nucleotide sugar metabolism    Butirosin and neomycin biosynthesis    HIF-1 signaling pathway    Insulin signaling pathway    Type II diabetes mellitus    Carbohydrate digestion and absorption   
Protein Interaction DatabaseHK1
Wikipedia pathwaysHK1
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)HK1
snp3D : Map Gene to Disease3098
SNP (GeneSNP Utah)HK1
SNP : HGBaseHK1
Genetic variants : HAPMAPHK1
Exome VariantHK1
1000_GenomesHK1 
ICGC programENSG00000156515 
Somatic Mutations in Cancer : COSMICHK1 
CONAN: Copy Number AnalysisHK1 
Mutations and Diseases : HGMDHK1
Genomic VariantsHK1  HK1 [DGVbeta]
dbVarHK1
ClinVarHK1
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM142600    235700   
MedgenHK1
GENETestsHK1
Disease Genetic AssociationHK1
Huge Navigator HK1 [HugePedia]  HK1 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneHK1
Homology/Alignments : Family Browser (UCSC)HK1
Phylogenetic Trees/Animal Genes : TreeFamHK1
Chemical/Protein Interactions : CTD3098
Chemical/Pharm GKB GenePA29300
Clinical trialHK1
Cancer Resource (Charite)ENSG00000156515
Other databases
Probes
Litterature
PubMed73 Pubmed reference(s) in Entrez
CoreMineHK1
iHOPHK1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 11 16:58:46 CEST 2014

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