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HLA-DPB2 (major histocompatibility complex, class II, DP beta 2 (pseudogene))

Identity

Alias_namesHLA-DP2B
Alias_symbol (synonym)DP2B
DPB2
Other aliasDPbeta2
HGNC (Hugo) HLA-DPB2
LocusID (NCBI) 3116
Atlas_Id 64330
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 33112516 and ends at 33129113 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HLA-DPB2   4941
Cards
Entrez_Gene (NCBI)HLA-DPB2  3116  major histocompatibility complex, class II, DP beta 2 (pseudogene)
AliasesDP2B; DPB2; DPbeta2; HLA-DP2B
GeneCards (Weizmann)HLA-DPB2
Ensembl hg19 (Hinxton)ENSG00000224557 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224557 [Gene_View]  ENSG00000224557 [Sequence]  chr6:33112516-33129113 [Contig_View]  HLA-DPB2 [Vega]
ICGC DataPortalENSG00000224557
TCGA cBioPortalHLA-DPB2
AceView (NCBI)HLA-DPB2
Genatlas (Paris)HLA-DPB2
WikiGenes3116
SOURCE (Princeton)HLA-DPB2
Genetics Home Reference (NIH)HLA-DPB2
Genomic and cartography
GoldenPath hg38 (UCSC)HLA-DPB2  -     chr6:33112516-33129113 +  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HLA-DPB2  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblHLA-DPB2 - 6p21.32 [CytoView hg19]  HLA-DPB2 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIHLA-DPB2 [Mapview hg19]  HLA-DPB2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301188 BC017967
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)HLA-DPB2
Cluster EST : UnigeneHs.665450 [ NCBI ]
CGAP (NCI)Hs.665450
Alternative Splicing GalleryENSG00000224557
Gene ExpressionHLA-DPB2 [ NCBI-GEO ]   HLA-DPB2 [ EBI - ARRAY_EXPRESS ]   HLA-DPB2 [ SEEK ]   HLA-DPB2 [ MEM ]
Gene Expression Viewer (FireBrowse)HLA-DPB2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3116
GTEX Portal (Tissue expression)HLA-DPB2
Human Protein AtlasENSG00000224557-HLA-DPB2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HLA-DPB2
DMDM Disease mutations3116
Blocks (Seattle)HLA-DPB2
Human Protein Atlas [tissue]ENSG00000224557-HLA-DPB2 [tissue]
Protein Interaction databases
FunCoupENSG00000224557
BioGRIDHLA-DPB2
STRING (EMBL)HLA-DPB2
ZODIACHLA-DPB2
Ontologies - Pathways
Huge Navigator HLA-DPB2 [HugePedia]
snp3D : Map Gene to Disease3116
BioCentury BCIQHLA-DPB2
ClinGenHLA-DPB2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3116
Chemical/Pharm GKB GenePA35065
Clinical trialHLA-DPB2
Miscellaneous
canSAR (ICR)HLA-DPB2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHLA-DPB2
EVEXHLA-DPB2
GoPubMedHLA-DPB2
iHOPHLA-DPB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:49:01 CEST 2018

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