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HLA-DRB6 (major histocompatibility complex, class II, DR beta 6 (pseudogene))

Identity

Other alias-
HGNC (Hugo) HLA-DRB6
LocusID (NCBI) 3128
Atlas_Id 64333
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32552713 and ends at 32560002 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HLA-DPB1 (6p21.32) / HLA-DRB6 (6p21.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HLA-DRB6   4954
Cards
Entrez_Gene (NCBI)HLA-DRB6  3128  major histocompatibility complex, class II, DR beta 6 (pseudogene)
Aliases
GeneCards (Weizmann)HLA-DRB6
Ensembl hg19 (Hinxton)ENSG00000229391 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229391 [Gene_View]  ENSG00000229391 [Sequence]  chr6:32552713-32560002 [Contig_View]  HLA-DRB6 [Vega]
ICGC DataPortalENSG00000229391
TCGA cBioPortalHLA-DRB6
AceView (NCBI)HLA-DRB6
Genatlas (Paris)HLA-DRB6
WikiGenes3128
SOURCE (Princeton)HLA-DRB6
Genetics Home Reference (NIH)HLA-DRB6
Genomic and cartography
GoldenPath hg38 (UCSC)HLA-DRB6  -     chr6:32552713-32560002 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HLA-DRB6  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblHLA-DRB6 - 6p21.32 [CytoView hg19]  HLA-DRB6 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIHLA-DRB6 [Mapview hg19]  HLA-DRB6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF005487 L76565 L76566 U33547
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HLA-DRB6
Cluster EST : UnigeneHs.723344 [ NCBI ]
CGAP (NCI)Hs.723344
Alternative Splicing GalleryENSG00000229391
Gene ExpressionHLA-DRB6 [ NCBI-GEO ]   HLA-DRB6 [ EBI - ARRAY_EXPRESS ]   HLA-DRB6 [ SEEK ]   HLA-DRB6 [ MEM ]
Gene Expression Viewer (FireBrowse)HLA-DRB6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3128
GTEX Portal (Tissue expression)HLA-DRB6
Human Protein AtlasENSG00000229391-HLA-DRB6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HLA-DRB6
DMDM Disease mutations3128
Blocks (Seattle)HLA-DRB6
Human Protein Atlas [tissue]ENSG00000229391-HLA-DRB6 [tissue]
IPIIPI00878848   
Protein Interaction databases
FunCoupENSG00000229391
BioGRIDHLA-DRB6
STRING (EMBL)HLA-DRB6
ZODIACHLA-DRB6
Ontologies - Pathways
Huge Navigator HLA-DRB6 [HugePedia]
snp3D : Map Gene to Disease3128
BioCentury BCIQHLA-DRB6
ClinGenHLA-DRB6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3128
Chemical/Pharm GKB GenePA35077
Clinical trialHLA-DRB6
Miscellaneous
canSAR (ICR)HLA-DRB6 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHLA-DRB6
EVEXHLA-DRB6
GoPubMedHLA-DRB6
iHOPHLA-DRB6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:49:02 CEST 2018

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