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HLA-K (major histocompatibility complex, class I, K (pseudogene))

Identity

Alias_namesHLAK
HLA70
Alias_symbol (synonym)HLA-70
Other alias
HGNC (Hugo) HLA-K
LocusID (NCBI) 3138
Atlas_Id 77381
Location 6_GL000256v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 1226019 and ends at 1229420 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HLA-K   4969
Cards
Entrez_Gene (NCBI)HLA-K  3138  major histocompatibility complex, class I, K (pseudogene)
AliasesHLA-70; HLA70; HLAK
GeneCards (Weizmann)HLA-K
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6_GL000256v2_alt:1226019-1229420 [Contig_View]  HLA-K [Vega]
TCGA cBioPortalHLA-K
AceView (NCBI)HLA-K
Genatlas (Paris)HLA-K
WikiGenes3138
SOURCE (Princeton)HLA-K
Genetics Home Reference (NIH)HLA-K
Genomic and cartography
GoldenPath hg38 (UCSC)HLA-K  -     chr6_GL000256v2_alt:1226019-1229420 +  6_GL000256v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HLA-K  -     6_GL000256v2_alt   [Description]    (hg19-Feb_2009)
EnsemblHLA-K - 6_GL000256v2_alt [CytoView hg19]  HLA-K - 6_GL000256v2_alt [CytoView hg38]
Mapping of homologs : NCBIHLA-K [Mapview hg19]  HLA-K [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092921 BC035647
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_015982 NT_113891 NT_167244 NT_167245 NT_167246 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)HLA-K
Cluster EST : UnigeneHs.728972 [ NCBI ]
CGAP (NCI)Hs.728972
Gene ExpressionHLA-K [ NCBI-GEO ]   HLA-K [ EBI - ARRAY_EXPRESS ]   HLA-K [ SEEK ]   HLA-K [ MEM ]
Gene Expression Viewer (FireBrowse)HLA-K [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3138
GTEX Portal (Tissue expression)HLA-K
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HLA-K
DMDM Disease mutations3138
Blocks (Seattle)HLA-K
Protein Interaction databases
BioGRIDHLA-K
STRING (EMBL)HLA-K
ZODIACHLA-K
Ontologies - Pathways
Huge Navigator HLA-K [HugePedia]
snp3D : Map Gene to Disease3138
BioCentury BCIQHLA-K
ClinGenHLA-K
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3138
Chemical/Pharm GKB GenePA35086
Clinical trialHLA-K
Miscellaneous
canSAR (ICR)HLA-K (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHLA-K
EVEXHLA-K
GoPubMedHLA-K
iHOPHLA-K
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:14:09 CET 2017

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