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HMGA1P7 (high mobility group AT-hook 1 pseudogene 7)

Identity

Alias_namesHMGA1L7
high mobility group AT-hook 1-like 7
Other alias
HGNC (Hugo) HMGA1P7
LocusID (NCBI) 387065
Atlas_Id 55319
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 134113971 and ends at 134117680 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HMGA1P7   19122
Cards
Entrez_Gene (NCBI)HMGA1P7  387065  high mobility group AT-hook 1 pseudogene 7
AliasesHMGA1L7
GeneCards (Weizmann)HMGA1P7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:134113971-134117680 [Contig_View]  HMGA1P7 [Vega]
TCGA cBioPortalHMGA1P7
AceView (NCBI)HMGA1P7
Genatlas (Paris)HMGA1P7
WikiGenes387065
SOURCE (Princeton)HMGA1P7
Genetics Home Reference (NIH)HMGA1P7
Genomic and cartography
GoldenPath hg38 (UCSC)HMGA1P7  -     chr6:134113971-134117680 -  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HMGA1P7  -     6q23.2   [Description]    (hg19-Feb_2009)
EnsemblHMGA1P7 - 6q23.2 [CytoView hg19]  HMGA1P7 - 6q23.2 [CytoView hg38]
Mapping of homologs : NCBIHMGA1P7 [Mapview hg19]  HMGA1P7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF514910 DA252277 DB179218 DB306383
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HMGA1P7
Cluster EST : UnigeneHs.571061 [ NCBI ]
CGAP (NCI)Hs.571061
Gene ExpressionHMGA1P7 [ NCBI-GEO ]   HMGA1P7 [ EBI - ARRAY_EXPRESS ]   HMGA1P7 [ SEEK ]   HMGA1P7 [ MEM ]
Gene Expression Viewer (FireBrowse)HMGA1P7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387065
GTEX Portal (Tissue expression)HMGA1P7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HMGA1P7
DMDM Disease mutations387065
Blocks (Seattle)HMGA1P7
Protein Interaction databases
BioGRIDHMGA1P7
STRING (EMBL)HMGA1P7
ZODIACHMGA1P7
Ontologies - Pathways
Huge Navigator HMGA1P7 [HugePedia]
snp3D : Map Gene to Disease387065
BioCentury BCIQHMGA1P7
ClinGenHMGA1P7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387065
Chemical/Pharm GKB GenePA134964436
Clinical trialHMGA1P7
Miscellaneous
canSAR (ICR)HMGA1P7 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHMGA1P7
EVEXHMGA1P7
GoPubMedHMGA1P7
iHOPHMGA1P7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:11:17 CET 2018

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