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HMGB1P34 (high mobility group box 1 pseudogene 34)

Identity

Alias_nameshigh-mobility group box 1 pseudogene 34
Other alias-
HGNC (Hugo) HMGB1P34
LocusID (NCBI) 100420100
Atlas_Id 77620
Location 14q24.1  [Link to chromosome band 14q24]
Location_base_pair Starts at 67614929 and ends at 67616616 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HMGB1P34   23342
Cards
Entrez_Gene (NCBI)HMGB1P34  100420100  high mobility group box 1 pseudogene 34
Aliases
GeneCards (Weizmann)HMGB1P34
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:67614929-67616616 [Contig_View]  HMGB1P34 [Vega]
TCGA cBioPortalHMGB1P34
AceView (NCBI)HMGB1P34
Genatlas (Paris)HMGB1P34
WikiGenes100420100
SOURCE (Princeton)HMGB1P34
Genetics Home Reference (NIH)HMGB1P34
Genomic and cartography
GoldenPath hg38 (UCSC)HMGB1P34  -     chr14:67614929-67616616 +  14q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HMGB1P34  -     14q24.1   [Description]    (hg19-Feb_2009)
EnsemblHMGB1P34 - 14q24.1 [CytoView hg19]  HMGB1P34 - 14q24.1 [CytoView hg38]
Mapping of homologs : NCBIHMGB1P34 [Mapview hg19]  HMGB1P34 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC068102
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HMGB1P34
Cluster EST : UnigeneHs.640300 [ NCBI ]
CGAP (NCI)Hs.640300
Gene ExpressionHMGB1P34 [ NCBI-GEO ]   HMGB1P34 [ EBI - ARRAY_EXPRESS ]   HMGB1P34 [ SEEK ]   HMGB1P34 [ MEM ]
Gene Expression Viewer (FireBrowse)HMGB1P34 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100420100
GTEX Portal (Tissue expression)HMGB1P34
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HMGB1P34
DMDM Disease mutations100420100
Blocks (Seattle)HMGB1P34
Protein Interaction databases
BioGRIDHMGB1P34
STRING (EMBL)HMGB1P34
ZODIACHMGB1P34
Ontologies - Pathways
Huge Navigator HMGB1P34 [HugePedia]
snp3D : Map Gene to Disease100420100
BioCentury BCIQHMGB1P34
ClinGenHMGB1P34
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100420100
Clinical trialHMGB1P34
Miscellaneous
canSAR (ICR)HMGB1P34 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHMGB1P34
EVEXHMGB1P34
GoPubMedHMGB1P34
iHOPHMGB1P34
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:29:33 CET 2017

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