Atlas of Genetics and Cytogenetics in Oncology and Haematology

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HN1 (hematological and neurological expressed 1)

Identity

Other namesARM2
HN1A
HGNC (Hugo) HN1
LocusID (NCBI) 51155
Location 17q25.1
Location_base_pair Starts at 73131344 and ends at 73150774 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)HN1   14569
Entrez_Gene (NCBI)HN1  51155  hematological and neurological expressed 1
Cards
GeneCards (Weizmann)HN1
Ensembl (Hinxton)ENSG00000189159 [Gene_View]  chr17:73131344-73150774 [Contig_View]  HN1 [Vega]
AceView (NCBI)HN1
Genatlas (Paris)HN1
SOURCE (Stanford)NM_001002032 NM_001002033 NM_016185
Genomic and cartography
GoldenPath (UCSC)HN1  -  17q25.1   chr17:73131344-73150774 -  17q25.1   [Description]    (hg19-Feb_2009)
EnsemblHN1 - 17q25.1 [CytoView]
Mapping of homologs : NCBIHN1 [Mapview]
Gene and transcription
Genbank (Entrez)AF060925 AF086910 AF177862 AF266846 AK223321
RefSeq transcript (SRS)NM_001002032 NM_001002033 NM_016185
RefSeq transcript (Entrez)NM_001002032 NM_001002033 NM_016185
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838454 NW_004078092
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838454 NW_004078092
Consensus coding sequences : CCDS (NCBI)HN1
Cluster EST : UnigeneHs.532803 [ SRS ] Hs.532803 [ NCBI ]
CGAP (NCI)Hs.532803
Alternative Splicing : Fast-db (Paris)GSHG0013722
Alternative Splicing GalleryENSG00000189159
Gene ExpressionHN1 [ NCBI-GEO ]   HN1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UK76 (SRS) Q9UK76 (Uniprot)
NextProtQ9UK76
With graphics : InterProQ9UK76
Splice isoforms : SwissVarQ9UK76(Swissvar)
Related proteins : CluSTrQ9UK76
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM51155
Blocks (Seattle)Q9UK76
Human Protein AtlasENSG00000189159
HPRD13665
IPIIPI00007764   IPI00384857   IPI00447316   IPI01016073   IPI00385961   IPI00916337   IPI00917313   
Protein Interaction databases
DIP (DOE-UCLA)Q9UK76
IntAct (EBI)Q9UK76
FunCoupENSG00000189159
REACTOMEHN1
Protein Interaction Database51155
BioGRIDHN1
InParanoidQ9UK76
Interologous Interaction database Q9UK76
IntegromeDBHN1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)HN1
SNP (GeneSNP Utah)HN1
SNP : HGBaseHN1
Genetic variants : HAPMAPHN1
Somatic Mutations in Cancer : COSMICHN1 
CONAN: Copy Number AnalysisHN1 
Mutations and Diseases : HGMDHN1
OMIM
GENETests
Disease Genetic AssociationHN1
Huge Navigator HN1 [HugePedia]  HN1 [HugeCancerGEM]
Genomic VariantsHN1  HN1 [DGVbeta]
ClinVarHN1
snp3D : Map Gene to Disease51155
General knowledge
Homologs : HomoloGeneHN1
Homology/Alignments : Family Browser (UCSC)HN1
Phylogenetic Trees/Animal Genes : TreeFamHN1
Chemical/Protein Interactions : CTD51155
Chemical/Pharm GKB GenePA29347
Clinical trialHN1
Cancer Resource (Charite)ENSG00000189159
Ontology : AmiGOnucleus  
Ontology : EGO-EBInucleus  
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
PubGeneHN1
iHOPHN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:34:30 CEST 2013
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