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HNF1A-AS1 (HNF1A antisense RNA 1)

Identity

Alias_namesC12orf27
NCRNA00262
chromosome 12 open reading frame 27
non-protein coding RNA 262
HNF1A antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ38690
Other alias
HGNC (Hugo) HNF1A-AS1
LocusID (NCBI) 283460
Atlas_Id 55665
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 121407641 and ends at 121410095 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HNF1A-AS1   26785
Cards
Entrez_Gene (NCBI)HNF1A-AS1  283460  HNF1A antisense RNA 1
AliasesC12orf27; NCRNA00262
GeneCards (Weizmann)HNF1A-AS1
Ensembl hg19 (Hinxton)ENSG00000241388 [Gene_View]  chr12:121407641-121410095 [Contig_View]  HNF1A-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000241388 [Gene_View]  chr12:121407641-121410095 [Contig_View]  HNF1A-AS1 [Vega]
ICGC DataPortalENSG00000241388
TCGA cBioPortalHNF1A-AS1
AceView (NCBI)HNF1A-AS1
Genatlas (Paris)HNF1A-AS1
WikiGenes283460
SOURCE (Princeton)HNF1A-AS1
Genetics Home Reference (NIH)HNF1A-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)HNF1A-AS1  -     chr12:121407641-121410095 -  12q24.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HNF1A-AS1  -     12q24.31   [Description]    (hg38-Dec_2013)
EnsemblHNF1A-AS1 - 12q24.31 [CytoView hg19]  HNF1A-AS1 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIHNF1A-AS1 [Mapview hg19]  HNF1A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096009
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929385
Consensus coding sequences : CCDS (NCBI)HNF1A-AS1
Cluster EST : UnigeneHs.612351 [ NCBI ]
CGAP (NCI)Hs.612351
Alternative Splicing GalleryENSG00000241388
Gene ExpressionHNF1A-AS1 [ NCBI-GEO ]   HNF1A-AS1 [ EBI - ARRAY_EXPRESS ]   HNF1A-AS1 [ SEEK ]   HNF1A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HNF1A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283460
GTEX Portal (Tissue expression)HNF1A-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HNF1A-AS1
DMDM Disease mutations283460
Blocks (Seattle)HNF1A-AS1
Human Protein AtlasENSG00000241388
IPIIPI00167651   
Protein Interaction databases
FunCoupENSG00000241388
BioGRIDHNF1A-AS1
STRING (EMBL)HNF1A-AS1
ZODIACHNF1A-AS1
Ontologies - Pathways
Huge Navigator HNF1A-AS1 [HugePedia]
snp3D : Map Gene to Disease283460
BioCentury BCIQHNF1A-AS1
ClinGenHNF1A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283460
Chemical/Pharm GKB GenePA165513193
Clinical trialHNF1A-AS1
Miscellaneous
canSAR (ICR)HNF1A-AS1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHNF1A-AS1
EVEXHNF1A-AS1
GoPubMedHNF1A-AS1
iHOPHNF1A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:09:24 CET 2017

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