Atlas of Genetics and Cytogenetics in Oncology and Haematology


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HNRNPCL2 (heterogeneous nuclear ribonucleoprotein C-like 2)

Identity

Alias_namesHNRNPCP5
heterogeneous nuclear ribonucleoprotein C pseudogene 5
Other alias
HGNC (Hugo) HNRNPCL2
LocusID (NCBI) 440563
Atlas_Id 64370
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 13182960 and ends at 13184326 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)HNRNPCL2   48813
Cards
Entrez_Gene (NCBI)HNRNPCL2  440563  heterogeneous nuclear ribonucleoprotein C-like 2
AliasesHNRNPCP5
GeneCards (Weizmann)HNRNPCL2
Ensembl hg19 (Hinxton)ENSG00000275774 [Gene_View]  chr1:13182960-13184326 [Contig_View]  HNRNPCL2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000275774 [Gene_View]  chr1:13182960-13184326 [Contig_View]  HNRNPCL2 [Vega]
ICGC DataPortalENSG00000275774
TCGA cBioPortalHNRNPCL2
AceView (NCBI)HNRNPCL2
Genatlas (Paris)HNRNPCL2
WikiGenes440563
SOURCE (Princeton)HNRNPCL2
Genetics Home Reference (NIH)HNRNPCL2
Genomic and cartography
GoldenPath hg19 (UCSC)HNRNPCL2  -     chr1:13182960-13184326 -  1p36.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)HNRNPCL2  -     1p36.21   [Description]    (hg38-Dec_2013)
EnsemblHNRNPCL2 - 1p36.21 [CytoView hg19]  HNRNPCL2 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIHNRNPCL2 [Mapview hg19]  HNRNPCL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC144551 BC157858 BC171863
RefSeq transcript (Entrez)NM_001136561
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NT_187517 NW_004929289
Consensus coding sequences : CCDS (NCBI)HNRNPCL2
Cluster EST : UnigeneHs.711869 [ NCBI ]
CGAP (NCI)Hs.711869
Alternative Splicing GalleryENSG00000275774
Gene ExpressionHNRNPCL2 [ NCBI-GEO ]   HNRNPCL2 [ EBI - ARRAY_EXPRESS ]   HNRNPCL2 [ SEEK ]   HNRNPCL2 [ MEM ]
Gene Expression Viewer (FireBrowse)HNRNPCL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440563
GTEX Portal (Tissue expression)HNRNPCL2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HNRNPCL2
DMDM Disease mutations440563
Blocks (Seattle)HNRNPCL2
Human Protein AtlasENSG00000275774
IPIIPI00735540   
Protein Interaction databases
FunCoupENSG00000275774
BioGRIDHNRNPCL2
STRING (EMBL)HNRNPCL2
ZODIACHNRNPCL2
Ontologies - Pathways
Huge Navigator HNRNPCL2 [HugePedia]
snp3D : Map Gene to Disease440563
BioCentury BCIQHNRNPCL2
ClinGenHNRNPCL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440563
Clinical trialHNRNPCL2
Miscellaneous
canSAR (ICR)HNRNPCL2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHNRNPCL2
EVEXHNRNPCL2
GoPubMedHNRNPCL2
iHOPHNRNPCL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:02 CET 2017

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