HNRNPF (heterogeneous nuclear ribonucleoprotein F)

Identity

Other names	HNRPF
	MGC110997
	OK/SW-cl.23
	mcs94-1
HGNC	HNRNPF
Location	10q11.21
Location_base_pair	Starts at 43201071 and ends at 43224702 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	HNRNPF   5039
Entrez_Gene	HNRNPF  3185  heterogeneous nuclear ribonucleoprotein F
	Cards
GeneCards	HNRNPF
Ensembl	HNRNPF [Search_View]   ENSG00000169813 [Gene_View]
Genatlas	HNRNPF
GeneLynx	HNRNPF
eGenome	HNRNPF
euGene	3185
	Genomic and cartography
GoldenPath	HNRNPF  -  10q11.21   chr10:43201071-43224702 -  10q11.21   [Description]    (hg18-March_2006)
Ensembl	HNRNPF - 10q11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	HNRNPF
	Gene and transcription
Genbank	AB062287 [ ENTREZ ]
Genbank	AI133166 [ ENTREZ ]
Genbank	AK001364 [ ENTREZ ]
Genbank	AL542769 [ ENTREZ ]
Genbank	AW069399 [ ENTREZ ]
RefSeq	NM_001098204 [ SRS ]    NM_001098204 [ ENTREZ ]
RefSeq	NM_001098205 [ SRS ]    NM_001098205 [ ENTREZ ]
RefSeq	NM_001098206 [ SRS ]    NM_001098206 [ ENTREZ ]
RefSeq	NM_001098207 [ SRS ]    NM_001098207 [ ENTREZ ]
RefSeq	NM_001098208 [ SRS ]    NM_001098208 [ ENTREZ ]
RefSeq	NM_004966 [ SRS ]    NM_004966 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_033985 [ SRS ]    NT_033985 [ ENTREZ ]
RefSeq	NW_001837940 [ SRS ]    NW_001837940 [ ENTREZ ]
RefSeq	NW_924606 [ SRS ]    NW_924606 [ ENTREZ ]
AceView	HNRNPF AceView - NCBI
Unigene	Hs.712955 [ SRS ]    Hs.712955 [ NCBI ]     HS712955 [ spliceNest ]
Fast-db	9287 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P52597 [ SRS]    P52597 [ EXPASY ]     P52597 [ INTERPRO ]     P52597 [ UNIPROT ]
Prosite	PS50102 RRM [ SRS ]    PS50102 RRM [ Expasy ]
Interpro	IPR012677 a_b_plait_nuc_bd [ SRS ]    IPR012677 a_b_plait_nuc_bd [ EBI ]
Interpro	IPR000504 RRM_RNP1 [ SRS ]    IPR000504 RRM_RNP1 [ EBI ]
Interpro	IPR012996 Znf_CHHC [ SRS ]    IPR012996 Znf_CHHC [ EBI ]
CluSTr	P52597
Pfam	PF00076 RRM_1 [ SRS ]    PF00076 RRM_1 [ Sanger ]    pfam00076 [ NCBI-CDD ]
Pfam	PF08080 zf-RNPHF [ SRS ]    PF08080 zf-RNPHF [ Sanger ]    pfam08080 [ NCBI-CDD ]
Smart	SM00360 RRM [EMBL]
Blocks	P52597
PDB	2HGL [ SRS ]    2HGL [ PdbSum ],   2HGL [ IMB ]   2HGL [ RSDB ]
PDB	2HGM [ SRS ]    2HGM [ PdbSum ],   2HGM [ IMB ]   2HGM [ RSDB ]
HPRD	03023
	Protein Interaction databases
DIP	P52597
IntAct	P52597
	Polymorphism : SNP, mutations, diseases
OMIM	601037    [ map ]
GENECLINICS	601037
SNP	HNRNPF [dbSNP-NCBI]
SNP	NM_001098204 [SNP-NCI]
SNP	NM_001098205 [SNP-NCI]
SNP	NM_001098206 [SNP-NCI]
SNP	NM_001098207 [SNP-NCI]
SNP	NM_001098208 [SNP-NCI]
SNP	NM_004966 [SNP-NCI]
SNP	HNRNPF [GeneSNPs - Utah]  HNRNPF] [HGBASE - SRS]
HAPMAP	HNRNPF [HAPMAP]
HGMD	HNRNPF
	General knowledge
Family Browser	HNRNPF [UCSC Family Browser]
SOURCE	NM_001098204
SOURCE	NM_001098205
SOURCE	NM_001098206
SOURCE	NM_001098207
SOURCE	NM_001098208
SOURCE	NM_004966
SMD	Hs.712955
SAGE	Hs.712955
GO	nucleotide binding [Amigo]  nucleotide binding
GO	nuclear mRNA splicing, via spliceosome [Amigo]  nuclear mRNA splicing, via spliceosome
GO	RNA binding [Amigo]  RNA binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	spliceosome [Amigo]  spliceosome
GO	heterogeneous nuclear ribonucleoprotein complex [Amigo]  heterogeneous nuclear ribonucleoprotein complex
GO	regulation of RNA splicing [Amigo]  regulation of RNA splicing
PubGene	HNRNPF
TreeFam	HNRNPF
CTD	3185 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	HNRNPF Related clones (RZPD - Berlin)
	PubMed
PubMed	29 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:45:02 2008