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HOMER3-AS1 (HOMER3 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) HOMER3-AS1
LocusID (NCBI) 102724360
Atlas_Id 80275
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 18940254 and ends at 18946831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)HOMER3-AS1   53775
Cards
Entrez_Gene (NCBI)HOMER3-AS1  102724360  HOMER3 antisense RNA 1
Aliases
GeneCards (Weizmann)HOMER3-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:18940254-18946831 [Contig_View]  HOMER3-AS1 [Vega]
TCGA cBioPortalHOMER3-AS1
AceView (NCBI)HOMER3-AS1
Genatlas (Paris)HOMER3-AS1
WikiGenes102724360
SOURCE (Princeton)HOMER3-AS1
Genetics Home Reference (NIH)HOMER3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)HOMER3-AS1  -     chr19:18940254-18946831 +  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)HOMER3-AS1  -     19p13.11   [Description]    (hg19-Feb_2009)
GoldenPathHOMER3-AS1 - 19p13.11 [CytoView hg19]  HOMER3-AS1 - 19p13.11 [CytoView hg38]
genome Data Viewer NCBIHOMER3-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF511074 CF127232 DA366162 HY133933 HY154431
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)HOMER3-AS1
Gene ExpressionHOMER3-AS1 [ NCBI-GEO ]   HOMER3-AS1 [ EBI - ARRAY_EXPRESS ]   HOMER3-AS1 [ SEEK ]   HOMER3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)HOMER3-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of HOMER3-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724360
GTEX Portal (Tissue expression)HOMER3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)HOMER3-AS1
DMDM Disease mutations102724360
Blocks (Seattle)HOMER3-AS1
Protein Interaction databases
BioGRIDHOMER3-AS1
STRING (EMBL)HOMER3-AS1
ZODIACHOMER3-AS1
Ontologies - Pathways
Huge Navigator HOMER3-AS1 [HugePedia]
snp3D : Map Gene to Disease102724360
BioCentury BCIQHOMER3-AS1
ClinGenHOMER3-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD102724360
Clinical trialHOMER3-AS1
Miscellaneous
canSAR (ICR)HOMER3-AS1 (select the gene name)
HarmonizomeHOMER3-AS1
DataMed IndexHOMER3-AS1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineHOMER3-AS1
EVEXHOMER3-AS1
GoPubMedHOMER3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:58:27 CEST 2020

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